RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 PPP1R12CQ9BZL4 782 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 SPTLC3Q9NUV7 552 aa33.26■■■□□ 2.92
CAPNS1-206ENST00000588815 MEIS3P2A8K0S8 358 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 PIRO00625 290 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 ACO1P21399 889 aaKnown RBP33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 USP8P40818 1118 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 ASPAP45381 313 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 GUCY2FP51841 1108 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 SLC18A3Q16572 532 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 SCARA3Q6AZY7 606 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 TXLNBQ8N3L3 684 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 ARID3AQ99856 593 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 LUC7LQ9NQ29 371 aaKnown RBP33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 CLCN1P35523 988 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 ZNF571Q7Z3V5 609 aaPredicted RBP33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 TMEM161AQ9NX61 479 aa33.25■■■□□ 2.91
CAPNS1-206ENST00000588815 KRT5P13647 590 aa33.24■■■□□ 2.91
CAPNS1-206ENST00000588815 GRIK3Q13003 919 aa33.24■■■□□ 2.91
CAPNS1-206ENST00000588815 C10orf76Q5T2E6 689 aa33.24■■■□□ 2.91
CAPNS1-206ENST00000588815 RSPH1Q8WYR4 309 aa33.24■■■□□ 2.91
CAPNS1-206ENST00000588815 ELMO3Q96BJ8 720 aa33.24■■■□□ 2.91
CAPNS1-206ENST00000588815 DESI2Q9BSY9 194 aa33.24■■■□□ 2.91
CAPNS1-206ENST00000588815 LTBP2Q14767 1821 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 CYP2C18P33260 490 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 PDE6CP51160 858 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 CCL23P55773 120 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 TNNC1P63316 161 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 ZNF677Q86XU0 584 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 SCLYQ96I15 445 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 SYT11Q9BT88 431 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 NXF1Q9UBU9 619 aaKnown RBP33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 PCDHB4Q9Y5E5 795 aa33.23■■■□□ 2.91
CAPNS1-206ENST00000588815 ENPP3O14638 875 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 CYP26A1O43174 497 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 NAB2Q15742 525 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 ZNF662Q6ZS27 426 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 RNF169Q8NCN4 708 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 EPS8L1Q8TE68 723 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 ADAMTS1Q9UHI8 967 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 ALPK3Q96L96 1907 aa33.22■■■□□ 2.91
CAPNS1-206ENST00000588815 ATP8B3O60423 1300 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 KIAA0355O15063 1070 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 RPL9P32969 192 aaKnown RBP33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 SOX4Q06945 474 aaPredicted RBP33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 SV2CQ496J9 727 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 GLB1LQ6UWU2 654 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 UBE2Q1Q7Z7E8 422 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 ACRBPQ8NEB7 543 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 PPP1R13BQ96KQ4 1090 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 CISHQ9NSE2 258 aa33.21■■■□□ 2.91
CAPNS1-206ENST00000588815 CYP11B1P15538 503 aa33.2■■■□□ 2.91
CAPNS1-206ENST00000588815 PAX3P23760 479 aa33.2■■■□□ 2.91
CAPNS1-206ENST00000588815 TAF6P49848 677 aa33.2■■■□□ 2.91
CAPNS1-206ENST00000588815 SCNN1GP51170 649 aa33.2■■■□□ 2.91
CAPNS1-206ENST00000588815 TMEM270Q6UE05 265 aa33.2■■■□□ 2.91
CAPNS1-206ENST00000588815 AGPAT1Q99943 283 aa33.2■■■□□ 2.91
CAPNS1-206ENST00000588815 KANSL3Q9P2N6 904 aa33.2■■■□□ 2.91
CAPNS1-206ENST00000588815 TIMP1P01033 207 aa33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 ZNF132P52740 706 aa33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 GPIHBP1Q8IV16 184 aa33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 REXO1L1PQ8IX06 675 aa33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 C17orf53Q8N3J3 647 aaPredicted RBP33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 RBBP8NLQ8NC74 664 aaPredicted RBP33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 DDX27Q96GQ7 796 aaKnown RBP33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 MIOSQ9NXC5 875 aa33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 TRMT1Q9NXH9 659 aaKnown RBP33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 GDAP2Q9NXN4 497 aa33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 NOCTQ9UK39 431 aaKnown RBP33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 POLIQ9UNA4 740 aa33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 REXO2Q9Y3B8 237 aaKnown RBP33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 FNDC1Q4ZHG4 1894 aaPredicted RBP33.19■■■□□ 2.9
CAPNS1-206ENST00000588815 A0A087X0T9 212 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 FAM228BP0C875 321 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 TNFAIP3P21580 790 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 GFPT1Q06210 699 aaPredicted RBP33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 CNKSR3Q6P9H4 555 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 SLC47A2Q86VL8 602 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 UROC1Q96N76 676 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 HOXA2O43364 376 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 VAV2P52735 878 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 SLC30A5Q8TAD4 765 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 URGCPQ8TCY9 931 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 NAGPAQ9UK23 515 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 PCDHB7Q9Y5E2 793 aa33.18■■■□□ 2.9
CAPNS1-206ENST00000588815 USP27XA6NNY8 438 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 KPNA7A9QM74 516 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 ZNF263O14978 683 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 WEE2P0C1S8 567 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 FAM163BP0C2L3 166 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 CDR2Q01850 454 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 INCA1Q0VD86 236 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 TUSC3Q13454 348 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 SCARA5Q6ZMJ2 495 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 KIAA1328Q86T90 577 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 RNF19AQ9NV58 838 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 PCDHA13Q9Y5I0 950 aa33.17■■■□□ 2.9
CAPNS1-206ENST00000588815 PPEF2O14830 753 aa33.16■■■□□ 2.9
CAPNS1-206ENST00000588815 DPH6Q7L8W6 267 aa33.16■■■□□ 2.9
CAPNS1-206ENST00000588815 NOP9Q86U38 636 aaKnown RBP33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms