RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 FBXL5Q9UKA1 691 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 NR2E1Q9Y466 385 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 TIMM13Q9Y5L4 95 aaPredicted RBP16.03■□□□□ 0.16
ATG4D-207ENST00000587256 ANO9A1A5B4 782 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 ARHGEF37A1IGU5 675 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 ZNF233A6NK53 670 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 TGFB1I1O43294 461 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 ZMYND10O75800 440 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 CPB1P15086 417 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 PAX3P23760 479 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 TAF6P49848 677 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 LILRA4P59901 499 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 DPYDQ12882 1025 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 SNRNP35Q16560 246 aaKnown RBP16.02■□□□□ 0.16
ATG4D-207ENST00000587256 SLC8B1Q6J4K2 584 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 TDRD5Q8NAT2 981 aaKnown RBP16.02■□□□□ 0.16
ATG4D-207ENST00000587256 GOLGA5Q8TBA6 731 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 SLC7A14Q8TBB6 771 aa16.02■□□□□ 0.16
ATG4D-207ENST00000587256 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
ATG4D-207ENST00000587256 CGNQ9P2M7 1197 aaKnown RBP16.02■□□□□ 0.16
ATG4D-207ENST00000587256 C5orf42Q9H799 3197 aa16.02■□□□□ 0.15
ATG4D-207ENST00000587256 PIRO00625 290 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 SPTLC1O15269 473 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 KIF20AO95235 890 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 ITGB3P05106 788 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 POLR2BP30876 1174 aaKnown RBP16.01■□□□□ 0.15
ATG4D-207ENST00000587256 FAM160A1Q05DH4 1040 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 SURF1Q15526 300 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 SV2CQ496J9 727 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 LMBRD2Q68DH5 695 aaPredicted RBP16.01■□□□□ 0.15
ATG4D-207ENST00000587256 OVOS1Q6IE37 1185 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 CYP26C1Q6V0L0 522 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 RNF135Q8IUD6 432 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 XXYLT1Q8NBI6 393 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 KHSRPQ92945 711 aaKnown RBP eCLIP16.01■□□□□ 0.15
ATG4D-207ENST00000587256 ZNF707Q96C28 371 aaPredicted RBP16.01■□□□□ 0.15
ATG4D-207ENST00000587256 ANKRD36BP1Q96IX9 119 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 FAM84AQ96KN4 292 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 SENP8Q96LD8 212 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 MTMR12Q9C0I1 747 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 POLIQ9UNA4 740 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 R3HCC1Q9Y3T6 440 aaKnown RBP16.01■□□□□ 0.15
ATG4D-207ENST00000587256 DENND4AQ7Z401 1863 aa16.01■□□□□ 0.15
ATG4D-207ENST00000587256 C2orf16Q68DN1 1984 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 CLUHO75153 1309 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 WDR27A2RRH5 827 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 C2CD4DB7Z1M9 353 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 PRRG1O14668 218 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 DCXO43602 365 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 EXOC3O60645 756 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 XYLBO75191 536 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 RHOBTB3O94955 611 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 TNNC2P02585 160 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 KRT19P08727 400 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 HNRNPA1P09651 372 aaKnown RBP eCLIP16■□□□□ 0.15
ATG4D-207ENST00000587256 ALADP13716 330 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 TYMPP19971 482 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 ELF1P32519 619 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 PNPLA4P41247 253 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 MRPL58Q14197 206 aaKnown RBP16■□□□□ 0.15
ATG4D-207ENST00000587256 C12orf56Q8IXR9 622 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 FMR1NBQ8N0W7 255 aaPredicted RBP16■□□□□ 0.15
ATG4D-207ENST00000587256 C1orf127Q8N9H9 656 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 RDH13Q8NBN7 331 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 FNBP1Q96RU3 617 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 RHOBTB2Q9BYZ6 727 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 PRKD2Q9BZL6 878 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 CHMP5Q9NZZ3 219 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 MUTYHQ9UIF7 546 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 ITGA11Q9UKX5 1188 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 TSC2P49815 1807 aa16■□□□□ 0.15
ATG4D-207ENST00000587256 CCL16O15467 120 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 TBC1D4O60343 1298 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 OAZ2O95190 189 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 DLATP10515 647 aaKnown RBP15.99■□□□□ 0.15
ATG4D-207ENST00000587256 HOXA9P31269 272 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 BFSP1Q12934 665 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 PNOCQ13519 176 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 OTOP3Q7RTS5 596 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 METTL23Q86XA0 190 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 WDR49Q8IV35 697 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 ZNF461Q8TAF7 563 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 CCDC127Q96BQ5 260 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 ACSF2Q96CM8 615 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-207ENST00000587256 OXCT2Q9BYC2 517 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-207ENST00000587256 EPHX3Q9H6B9 360 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 CYP4F11Q9HBI6 524 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 INTS13Q9NVM9 706 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 DSEQ9UL01 958 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 AGAP1Q9UPQ3 857 aa15.99■□□□□ 0.15
ATG4D-207ENST00000587256 MTCL1Q9Y4B5 1905 aaKnown RBP15.99■□□□□ 0.15
ATG4D-207ENST00000587256 PTPRJQ12913 1337 aa15.98■□□□□ 0.15
ATG4D-207ENST00000587256 OR6C75A6NL08 312 aa15.98■□□□□ 0.15
ATG4D-207ENST00000587256 KPNA7A9QM74 516 aa15.98■□□□□ 0.15
ATG4D-207ENST00000587256 CYB561D2O14569 222 aa15.98■□□□□ 0.15
ATG4D-207ENST00000587256 LRG1P02750 347 aa15.98■□□□□ 0.15
ATG4D-207ENST00000587256 OR4Q2P0C623 313 aa15.98■□□□□ 0.15
ATG4D-207ENST00000587256 TNNI1P19237 187 aa15.98■□□□□ 0.15
ATG4D-207ENST00000587256 GBP2P32456 591 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms