RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 ZSWIM3Q96MP5 696 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 BCO2Q9BYV7 579 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 OSBPL6Q9BZF3 934 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 SEMA4AQ9H3S1 761 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 HEBP1Q9NRV9 189 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 SPATA6Q9NWH7 488 aaPredicted RBP15.24■□□□□ 0.03
ATG4D-206ENST00000586863 TBX20Q9UMR3 447 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 UBQLN1Q9UMX0 589 aaKnown RBP15.24■□□□□ 0.03
ATG4D-206ENST00000586863 SMC3Q9UQE7 1217 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 YIPF1Q9Y548 306 aa15.24■□□□□ 0.03
ATG4D-206ENST00000586863 TCHHQ07283 1943 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 NCANO14594 1321 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 ZNF197O14709 1029 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 SLC26A4O43511 780 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 MICAL2O94851 1124 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 FAM13AO94988 1023 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 OAZ2O95190 189 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 PIGRP01833 764 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 GJA1P17302 382 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 PLCG1P19174 1290 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 CYP3A5P20815 502 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 EPHA5P54756 1037 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 MCM6Q14566 821 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 KARSQ15046 597 aaKnown RBP15.23■□□□□ 0.03
ATG4D-206ENST00000586863 CYP4A22Q5TCH4 519 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 IQCEQ6IPM2 695 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 SLC39A4Q6P5W5 647 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 ZC3H14Q6PJT7 736 aaKnown RBP15.23■□□□□ 0.03
ATG4D-206ENST00000586863 ELMOD1Q8N336 334 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 MYCT1Q8N699 235 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 ASB16Q96NS5 453 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 PGLYRP2Q96PD5 576 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 CRISPLD1Q9H336 500 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
ATG4D-206ENST00000586863 OGTO15294 1046 aa15.22■□□□□ 0.03
ATG4D-206ENST00000586863 MYL4P12829 197 aa15.22■□□□□ 0.03
ATG4D-206ENST00000586863 LARP1BQ659C4 914 aaKnown RBP15.22■□□□□ 0.03
ATG4D-206ENST00000586863 RAD54LQ92698 747 aa15.22■□□□□ 0.03
ATG4D-206ENST00000586863 DNASE1L2Q92874 299 aa15.22■□□□□ 0.03
ATG4D-206ENST00000586863 ZNF512Q96ME7 567 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-206ENST00000586863 RPF1Q9H9Y2 349 aaKnown RBP15.22■□□□□ 0.03
ATG4D-206ENST00000586863 ZFP14Q9HCL3 533 aa15.22■□□□□ 0.03
ATG4D-206ENST00000586863 ASAH2Q9NR71 780 aa15.22■□□□□ 0.03
ATG4D-206ENST00000586863 MAFFQ9ULX9 164 aa15.22■□□□□ 0.03
ATG4D-206ENST00000586863 A0A0B4J269 797 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 TISP43B9A030 160 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 LAMTOR5O43504 91 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 TRAK2O60296 914 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 KRT18P05783 430 aaKnown RBP15.21■□□□□ 0.03
ATG4D-206ENST00000586863 ADRB2P07550 413 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 NFICP08651 508 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 NMT1P30419 496 aaKnown RBP15.21■□□□□ 0.03
ATG4D-206ENST00000586863 VIPR2P41587 438 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 MCM2P49736 904 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 FZD5Q13467 585 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 TEAD2Q15562 447 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 KYAT1Q16773 422 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 JADE1Q6IE81 842 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 VITQ6UXI7 678 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 DSTYKQ6XUX3 929 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 ZNF852Q6ZMS4 543 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 USP37Q86T82 979 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 TMC8Q8IU68 726 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 MAP4K3Q8IVH8 894 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 RASSF8Q8NHQ8 419 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 SHKBP1Q8TBC3 707 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 SMARCD2Q92925 531 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 CLDN23Q96B33 292 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 MSTO1Q9BUK6 570 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 BRD9Q9H8M2 597 aa15.21■□□□□ 0.03
ATG4D-206ENST00000586863 UPF2Q9HAU5 1272 aaKnown RBP15.21■□□□□ 0.03
ATG4D-206ENST00000586863 CPSF3Q9UKF6 684 aaKnown RBP15.21■□□□□ 0.03
ATG4D-206ENST00000586863 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.21■□□□□ 0.03
ATG4D-206ENST00000586863 NUP210Q8TEM1 1887 aaPredicted RBP15.2■□□□□ 0.02
ATG4D-206ENST00000586863 OR6C75A6NL08 312 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 SPTLC1O15269 473 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 XPOTO43592 962 aaKnown RBP15.2■□□□□ 0.02
ATG4D-206ENST00000586863 TBCAO75347 108 aaKnown RBP15.2■□□□□ 0.02
ATG4D-206ENST00000586863 BMP15O95972 392 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 TYMPP19971 482 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 LONP1P36776 959 aaKnown RBP15.2■□□□□ 0.02
ATG4D-206ENST00000586863 MAGEA9P43362 315 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 ID4P47928 161 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 LILRA4P59901 499 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 DUSP4Q13115 394 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 GPR17Q13304 367 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 SF3A1Q15459 793 aaKnown RBP15.2■□□□□ 0.02
ATG4D-206ENST00000586863 ZNF528Q3MIS6 628 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 SPATA1Q5VX52 437 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 OVOS1Q6IE37 1185 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 ZNF687Q8N1G0 1237 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 SUMF1Q8NBK3 374 aa15.2■□□□□ 0.02
ATG4D-206ENST00000586863 LEMD2Q8NC56 503 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms