RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 UNC93B1Q9H1C4 597 aa16.04■□□□□ 0.16
CDK5RAP3-236ENST00000584991 PTPRHQ9HD43 1115 aa16.04■□□□□ 0.16
CDK5RAP3-236ENST00000584991 FAM114A2Q9NRY5 505 aa16.04■□□□□ 0.16
CDK5RAP3-236ENST00000584991 GGA2Q9UJY4 613 aa16.04■□□□□ 0.16
CDK5RAP3-236ENST00000584991 DDX3XO00571 662 aaKnown RBP eCLIP16.03■□□□□ 0.161e-8■■■□□ 15.4
CDK5RAP3-236ENST00000584991 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CABYRO75952 493 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 MYCP01106 439 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 GCLMP48507 274 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 MCL1Q07820 350 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 BIRC3Q13489 604 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 TAF2Q6P1X5 1199 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 C10orf67Q8IYJ2 551 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 NME8Q8N427 588 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 C3orf20Q8ND61 904 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 TMC2Q8TDI7 906 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 PIK3R5Q8WYR1 880 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 RFFLQ8WZ73 363 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 POP1Q99575 1024 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 TNFSF13BQ9Y275 285 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CNTNAP2Q9UHC6 1331 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 F8VZ95 297 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 EVI5O60447 810 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 ERLIN2O94905 339 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CPP00450 1065 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 FAM153BP0C7A2 387 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 ARF4P18085 180 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 MYL7Q01449 175 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 ITGA7Q13683 1181 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 ZNF568Q3ZCX4 644 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 FAM153CQ494X1 144 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 SESTD1Q86VW0 696 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 SYT11Q9BT88 431 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CARD9Q9H257 536 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 FAM153AQ9UHL3 310 aa16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 PACSIN2Q9UNF0 486 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-236ENST00000584991 BRCA2P51587 3418 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 KRIT1O00522 736 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 OGTO15294 1046 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 PMM2O15305 246 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 FAM189A1O60320 539 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 TSPAN1O60635 241 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 DLATP10515 647 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 TNFSF9P41273 254 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 GALCP54803 685 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CETN1Q12798 172 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 MTFR1Q15390 333 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 ENOX2Q16206 610 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 USP37Q86T82 979 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CTNNBL1Q8WYA6 563 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 TSEN34Q9BSV6 310 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 CDT1Q9H211 546 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 TMEM51Q9NW97 253 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 APEX2Q9UBZ4 518 aa16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 NOC2LQ9Y3T9 749 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-236ENST00000584991 ANKRD62A6NC57 917 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 EIF4BP23588 611 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 WNT7BP56706 349 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PSMD6Q15008 389 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CATSPER4Q7RTX7 472 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RHOT2Q8IXI1 618 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ARRDC4Q8NCT1 418 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 HINFPQ9BQA5 517 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TMEM117Q9H0C3 514 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RAB17Q9H0T7 212 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 EPN3Q9H201 632 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PDZD7Q9H5P4 517 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TMBIM4Q9HC24 238 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TOPORSQ9NS56 1045 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DNAJC12Q9UKB3 198 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 KRT14P02533 472 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 NR1D1P20393 614 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GBP1P32455 592 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 OSTNP61366 133 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DRAP1Q14919 205 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SNX17Q15036 470 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PTGISQ16647 500 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MICALCLQ6ZW33 695 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SERINC5Q86VE9 423 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 GPIHBP1Q8IV16 184 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 WNT8BQ93098 351 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MYZAPP0CAP1 466 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 ECHS1P30084 290 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MXI1P50539 228 aa16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MRPS25P82663 173 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MRPS6P82932 125 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms