RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TCEAL5Q5H9L2 206 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 C9orf57Q5W0N0 161 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 PTCRAQ6ISU1 281 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-215ENST00000584944 FRMD5Q7Z6J6 570 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 METTL23Q86XA0 190 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 EFCAB13Q8IY85 973 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 APPL2Q8NEU8 664 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 SPPL3Q8TCT6 385 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 PARD3BQ8TEW8 1205 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 DNAJC25Q9H1X3 360 aa14.94□□□□□ -0.02
TRAF4-215ENST00000584944 NGRNQ9NPE2 291 aaKnown RBP14.94□□□□□ -0.02
TRAF4-215ENST00000584944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRAF4-215ENST00000584944 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 LRRIQ3A6PVS8 624 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 SMTNL1A8MU46 457 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 TMEM189-UBE2V1I3L0A0 370 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 MEFVO15553 781 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 CXCL14O95715 111 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 CAVIN2O95810 425 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 SOD2P04179 222 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 TRIM49P0CI25 452 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 TRIM49CP0CI26 452 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 ODC1P11926 461 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 P4HA1P13674 534 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 CDK11BP21127 795 aaKnown RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 MYL5Q02045 173 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 ENPEPQ07075 957 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 PUS10Q3MIT2 529 aaKnown RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 PLPP4Q5VZY2 271 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 TRAPPC11Q7Z392 1133 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 TMEM173Q86WV6 379 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 GJD3Q8N144 294 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 OR5B17Q8NGF7 314 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 PABPC5Q96DU9 382 aaKnown RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 HPDLQ96IR7 371 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 DUSP9Q99956 384 aaKnown RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 TTPALQ9BTX7 342 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 EMILIN2Q9BXX0 1053 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 THAP9Q9H5L6 903 aa14.93□□□□□ -0.02
TRAF4-215ENST00000584944 NSUN3Q9H649 340 aaKnown RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 ARIH1Q9Y4X5 557 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-215ENST00000584944 H3BQ06 376 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-215ENST00000584944 HUS1O60921 280 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 N4BP1O75113 896 aaKnown RBP14.92□□□□□ -0.02
TRAF4-215ENST00000584944 GTF2H1P32780 548 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 GCLMP48507 274 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 TNNC1P63316 161 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 WDR44Q5JSH3 913 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 KRT39Q6A163 491 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 ELMSAN1Q6PJG2 1045 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-215ENST00000584944 LRRC52Q8N7C0 313 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 C1orf127Q8N9H9 656 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 RIN2Q8WYP3 895 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-215ENST00000584944 FAM122AQ96E09 287 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 CNOT6LQ96LI5 555 aaKnown RBP14.92□□□□□ -0.02
TRAF4-215ENST00000584944 MMS19Q96T76 1030 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 DNAI2Q9GZS0 605 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 MARCH5Q9NX47 278 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 DSEQ9UL01 958 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 NFE2L3Q9Y4A8 694 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 ATG2AQ2TAZ0 1938 aa14.92□□□□□ -0.02
TRAF4-215ENST00000584944 FSD2A1L4K1 749 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 KPNA7A9QM74 516 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 F8W810 466 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 GOLGA6L19H0YKK7 550 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 H7C4K7 107 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 I3L4J1 428 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 SRGAP2BP0DMP2 458 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 PRKCSHP14314 528 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-215ENST00000584944 TRIM21P19474 475 aaKnown RBP14.91□□□□□ -0.02
TRAF4-215ENST00000584944 BRCC3P46736 316 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 ZNF165P49910 485 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 MXI1P50539 228 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 WNT7BP56706 349 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 LILRA4P59901 499 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 DLG4P78352 724 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 NCOA4Q13772 614 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 ZNF699Q32M78 642 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 HSP90AA4PQ58FG1 418 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 EP400NLQ6ZTU2 488 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 C11orf57Q6ZUT1 292 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-215ENST00000584944 ZC3H3Q8IXZ2 948 aaKnown RBP14.91□□□□□ -0.02
TRAF4-215ENST00000584944 ENOX1Q8TC92 643 aaKnown RBP14.91□□□□□ -0.02
TRAF4-215ENST00000584944 BCL7CQ8WUZ0 217 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-215ENST00000584944 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 HERC2P3Q9BVR0 1158 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 TLE6Q9H808 572 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 TMEM8AQ9HCN3 771 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRAF4-215ENST00000584944 PTPRJQ12913 1337 aa14.91□□□□□ -0.02
TRAF4-215ENST00000584944 ANO9A1A5B4 782 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 FAM86C2PA6NEL3 165 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 PIRO00625 290 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 CYB561D2O14569 222 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 SYN3O14994 580 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 KLRC2P26717 231 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 ATICP31939 592 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 LTBRP36941 435 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms