RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 WDR72Q3MJ13 1102 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 LRRC8DQ7L1W4 858 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 RPUSD2Q8IZ73 545 aaKnown RBP14.98□□□□□ -0.01
UBBP4-202ENST00000584755 RBBP8NLQ8NC74 664 aaPredicted RBP14.98□□□□□ -0.01
UBBP4-202ENST00000584755 C18orf25Q96B23 403 aaPredicted RBP14.98□□□□□ -0.01
UBBP4-202ENST00000584755 PPP1R10Q96QC0 940 aaKnown RBP14.98□□□□□ -0.01
UBBP4-202ENST00000584755 IRX2Q9BZI1 471 aaPredicted RBP14.98□□□□□ -0.01
UBBP4-202ENST00000584755 CYP3A43Q9HB55 503 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 ACP6Q9NPH0 428 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 CISHQ9NSE2 258 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 KLK14Q9P0G3 267 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 TFR2Q9UP52 801 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 PCDHB4Q9Y5E5 795 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.98□□□□□ -0.01
UBBP4-202ENST00000584755 PIRO00625 290 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 P4HA1P13674 534 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 ATF7P17544 494 aaPredicted RBP14.97□□□□□ -0.01
UBBP4-202ENST00000584755 LRPAP1P30533 357 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 CTCFP49711 727 aaPredicted RBP14.97□□□□□ -0.01
UBBP4-202ENST00000584755 GNG11P61952 73 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 GLRA4Q5JXX5 417 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 C9orf57Q5W0N0 161 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 TMEM270Q6UE05 265 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 SYT10Q6XYQ8 523 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 SLC39A5Q6ZMH5 540 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 AGMOQ6ZNB7 445 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 PALB2Q86YC2 1186 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 ANKLE1Q8NAG6 615 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 GSTCDQ8NEC7 633 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 TOX2Q96NM4 488 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 WDR24Q96S15 920 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 PCDHB18PQ96TA0 734 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 ADAM2Q99965 735 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 PACSIN1Q9BY11 444 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 ISCUQ9H1K1 167 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 RGS18Q9NS28 235 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 GUCA1BQ9UMX6 200 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 POLIQ9UNA4 740 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 DUSP10Q9Y6W6 482 aa14.97□□□□□ -0.01
UBBP4-202ENST00000584755 MEIS3P2A8K0S8 358 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 INPPL1O15357 1258 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 MMEP08473 750 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 H2AFZP0C0S5 128 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 GJA8P48165 433 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 LBX1P52954 281 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 SOX4Q06945 474 aaPredicted RBP14.96□□□□□ -0.01
UBBP4-202ENST00000584755 MYO1EQ12965 1108 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 GPNMBQ14956 572 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 H2AFVQ71UI9 128 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 ZNF598Q86UK7 904 aaKnown RBP14.96□□□□□ -0.01
UBBP4-202ENST00000584755 RNF10Q8N5U6 811 aaKnown RBP14.96□□□□□ -0.01
UBBP4-202ENST00000584755 KIF18AQ8NI77 898 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 SDCBP2Q9H190 292 aa14.96□□□□□ -0.01
UBBP4-202ENST00000584755 NXF1Q9UBU9 619 aaKnown RBP14.96□□□□□ -0.01
UBBP4-202ENST00000584755 R3HCC1Q9Y3T6 440 aaKnown RBP14.96□□□□□ -0.01
UBBP4-202ENST00000584755 PPEF2O14830 753 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TLR3O15455 904 aaKnown RBP14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TFRCP02786 760 aaKnown RBP14.95□□□□□ -0.02
UBBP4-202ENST00000584755 WEE2P0C1S8 567 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 CAPN2P17655 700 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 FAM189BP81408 668 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 INCA1Q0VD86 236 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 RTN4RL1Q86UN2 441 aaPredicted RBP14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TTC39CQ8N584 583 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 PGBD4Q96DM1 585 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 ZFP42Q96MM3 310 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 FTHL17Q9BXU8 183 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 SMYD3Q9H7B4 428 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 UBN1Q9NPG3 1134 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 SLC38A7Q9NVC3 462 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 DNAI1Q9UI46 699 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 PAXBP1Q9Y5B6 917 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TANC1Q9C0D5 1861 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 SCN1AP35498 2009 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 A0A0A6YYK5 440 aaPredicted RBP14.95□□□□□ -0.02
UBBP4-202ENST00000584755 ARL5CA6NH57 179 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 C9IYK1 514 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 NBNO60934 754 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 RTN2O75298 545 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 CILPO75339 1184 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 CLSTN1O94985 981 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TMEM253P0C7T8 217 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 GNA15P30679 374 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 MLH1P40692 756 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 PNPLA4P41247 253 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 GALCP54803 685 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 ZNF569Q5MCW4 686 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TAF3Q5VWG9 929 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 SCARA5Q6ZMJ2 495 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TRIM72Q6ZMU5 477 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 LIMS2Q7Z4I7 341 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 ECHDC2Q86YB7 292 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 SLC35F6Q8N357 371 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 WHAMMQ8TF30 809 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 LINC01599Q8WXQ3 324 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 LPPQ93052 612 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 SECISBP2LQ93073 1101 aaKnown RBP14.95□□□□□ -0.02
UBBP4-202ENST00000584755 GAD1Q99259 594 aa14.95□□□□□ -0.02
UBBP4-202ENST00000584755 TSPYL2Q9H2G4 693 aaPredicted RBP14.95□□□□□ -0.02
UBBP4-202ENST00000584755 GDAP2Q9NXN4 497 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms