RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	MOCS1	Q9NZB8	636 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TUBD1	Q9UJT1	453 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	INTU	Q9ULD6	942 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RUVBL1	Q9Y265	456 aa	Known RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	USP15	Q9Y4E8	981 aa	Predicted RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	COMMD10	Q9Y6G5	202 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	EPRS	P07814	1512 aa	Known RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LMTK3	Q96Q04	1460 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PTPRG	P23470	1445 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CENPVL1	A0A0U1RR11	272 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GAGE12B	A1L429	117 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GAGE12H	A6NDE8	117 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	UNC119B	A6NIH7	251 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DRGX	A6NNA5	263 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FOXN3	O00409	490 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	HTRA2	O43464	458 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	EIF3J	O75822	258 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ZBED1	O96006	694 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SNRPA1	P09661	255 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RAP2A	P10114	183 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	IL2RB	P14784	551 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ALOX15	P16050	662 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SLC6A2	P23975	617 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CDC42EP1	Q00587	391 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DPT	Q07507	201 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SAFB	Q15424	915 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CCDC157	Q569K6	752 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FAM47A	Q5JRC9	791 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	METRNL	Q641Q3	311 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	B3GNT9	Q6UX72	402 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	KSR2	Q6VAB6	950 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GDF7	Q7Z4P5	450 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PJA1	Q8NG27	643 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PROKR1	Q8TCW9	393 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	NRG4	Q8WWG1	115 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MRI1	Q9BV20	369 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GTPBP4	Q9BZE4	634 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TDP1	Q9NUW8	608 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TMEM140	Q9NV12	185 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GNL3L	Q9NVN8	582 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CALCOCO1	Q9P1Z2	691 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PAXBP1	Q9Y5B6	917 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ACTL7A	Q9Y615	435 aa		4.55	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CCDC78	A2IDD5	438 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CCDC154	A6NI56	674 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RNASET2	O00584	256 aa	Known RBP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RAMP2	O60895	175 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RHOBTB3	O94955	611 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PRSS23	O95084	383 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ABHD16A	O95870	558 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ITGB1	P05556	798 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PCSK1	P29120	753 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ALDH1A3	P47895	512 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FLT3LG	P49771	235 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CLRN1	P58418	232 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ANO6	Q4KMQ2	910 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DARS2	Q6PI48	645 aa	Known RBP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	KCNV1	Q6PIU1	500 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MED25	Q71SY5	747 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RHOU	Q7L0Q8	258 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	UBE3B	Q7Z3V4	1068 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DAAM2	Q86T65	1068 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RSPH3	Q86UC2	560 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PLXDC1	Q8IUK5	500 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ZGPAT	Q8N5A5	531 aa	Known RBP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	C3orf20	Q8ND61	904 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GPR150	Q8NGU9	434 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CASKIN2	Q8WXE0	1202 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SLC46A2	Q9BY10	475 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	AKIP1	Q9NQ31	210 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ANLN	Q9NQW6	1124 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LANCL2	Q9NS86	450 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SLC23A1	Q9UHI7	598 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FZD1	Q9UP38	647 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CHST2	Q9Y4C5	530 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	IPP	Q9Y573	584 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	UHRF1BP1L	A0JNW5	1464 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TEX14	Q8IWB6	1497 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	KIF21B	O75037	1637 aa		4.54	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TNIK	Q9UKE5	1360 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754		A0A087X1B8	175 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PLEKHD1	A6NEE1	506 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GOLIM4	O00461	696 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PJA2	O43164	708 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PRPF3	O43395	683 aa	Known RBP	4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MGEA5	O60502	916 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	AMY1A	P04745	511 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	IFIT2	P09913	472 aa	Known RBP	4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SPDYE7P	Q495Y7	208 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TSHZ3	Q63HK5	1081 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LAIR1	Q6GTX8	287 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ARMC6	Q6NXE6	501 aa		4.53	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MRGPRG	Q86SM5	289 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms