RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ANO9A1A5B4 782 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 ARHGEF37A1IGU5 675 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 PIRO00625 290 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 VCPP55072 806 aaKnown RBP23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 ASIC1P78348 528 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 AMPD3Q01432 767 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 POU5F1Q01860 360 aaKnown RBP23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 RESP18Q5W5W9 173 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 USP37Q86T82 979 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 EFCAB13Q8IY85 973 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 FGF13Q92913 245 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 CBWD1Q9BRT8 395 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 RCOR1Q9UKL0 485 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 CDH7Q9ULB5 785 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 DUSP12Q9UNI6 340 aa23.24■■□□□ 1.31
PPP4R1-228ENST00000584074 TULP1O00294 542 aaPredicted RBP23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 LRG1P02750 347 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 CPB1P15086 417 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 GARTP22102 1010 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 WNT7BP56706 349 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 HTR4Q13639 388 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 PABPC1LQ4VXU2 614 aaKnown RBP23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 RNF19BQ6ZMZ0 732 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 SLC44A3Q8N4M1 653 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 SENP8Q96LD8 212 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 DPP3Q9NY33 737 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 ZDHHC9Q9Y397 364 aa23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 ZFP37Q9Y6Q3 630 aaPredicted RBP23.23■■□□□ 1.31
PPP4R1-228ENST00000584074 GOLGA8IPA6NC78 632 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 GOLGA8JA6NMD2 632 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 ANHXE9PGG2 379 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 IL18RAPO95256 599 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 OR4Q2P0C623 313 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 ODC1P11926 461 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 CASP1P29466 404 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 AVPR2P30518 371 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 ADCY1Q08828 1119 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 CNNM4Q6P4Q7 775 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 NXPE3Q969Y0 559 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 CHAMP1Q96JM3 812 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 C7orf25Q9BPX7 421 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 KCNH6Q9H252 994 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 PCIF1Q9H4Z3 704 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 TMEM206Q9H813 350 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 FAM13BQ9NYF5 915 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 AFF4Q9UHB7 1163 aaKnown RBP23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 INSL5Q9Y5Q6 135 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 NUMBLQ9Y6R0 609 aa23.22■■□□□ 1.31
PPP4R1-228ENST00000584074 RHOP08100 348 aa23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 TYMPP19971 482 aa23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 HOXD13P35453 343 aa23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 OVOS1Q6IE37 1185 aa23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 BRSK2Q8IWQ3 736 aa23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 NOC3LQ8WTT2 800 aaKnown RBP23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 ING5Q8WYH8 240 aa23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 OXCT2Q9BYC2 517 aaPredicted RBP23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 RBAKQ9NYW8 714 aaPredicted RBP23.21■■□□□ 1.31
PPP4R1-228ENST00000584074 MUC6Q6W4X9 2439 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 ZNF318Q5VUA4 2279 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 EXTL3O43909 919 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 VNN2O95498 520 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 LDHAP00338 332 aaKnown RBP23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 PTPN2P17706 415 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 PAX3P23760 479 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 TFAMQ00059 246 aaKnown RBP23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 SLC5A9Q2M3M2 681 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 PARM1Q6UWI2 310 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 STXBP4Q6ZWJ1 553 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 NPAS3Q8IXF0 933 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 FGF14Q92915 247 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 PGLYRP2Q96PD5 576 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 CORO1BQ9BR76 489 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 RPP25Q9BUL9 199 aaKnown RBP23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 BLZF1Q9H2G9 400 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 MFSD1Q9H3U5 465 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 MAGEF1Q9HAY2 307 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 FBXL21Q9UKT6 434 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 KCNH3Q9ULD8 1083 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 MAFFQ9ULX9 164 aa23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 MRPS23Q9Y3D9 190 aaKnown RBP23.2■■□□□ 1.3
PPP4R1-228ENST00000584074 OR6C75A6NL08 312 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 CFHP08603 1231 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 FAM26FQ5R3K3 315 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 ARMCX5Q6P1M9 558 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 EPM2AIP1Q7L775 607 aaPredicted RBP23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 NT5DC4Q86YG4 428 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 PRSS33Q8NF86 280 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 FAM84AQ96KN4 292 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 TMEM209Q96SK2 561 aa23.19■■□□□ 1.3
PPP4R1-228ENST00000584074 ANK1P16157 1881 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 CYB561D2O14569 222 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 SRFP11831 508 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 AFMP43652 599 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 TAF6P49848 677 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 TWF1Q12792 350 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 GPR17Q13304 367 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 UNC13DQ70J99 1090 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 GRAMD1CQ8IYS0 662 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 SIX5Q8N196 739 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms