RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 CASTOR2A6NHX0 329 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 RNF225M0QZC1 329 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 DGKIO75912 1065 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 FECHP22830 423 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 HNRNPH3P31942 346 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 AARSP49588 968 aaKnown RBP eCLIP17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 GATMP50440 423 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 EPHB4P54760 987 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ADKP55263 362 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 YWHAEP62258 255 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TNNC1P63316 161 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 DRAP1Q14919 205 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ZNF365Q70YC5 407 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 RRAGAQ7L523 313 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 COLGALT2Q8IYK4 626 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 UBR7Q8N806 425 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 OR8K1Q8NGG5 319 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 KAT5Q92993 513 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.469e-16■□□□□ 8.9
CDK5RAP3-230ENST00000584042 GPR88Q9GZN0 384 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 MTIF3Q9H2K0 278 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CYP3A43Q9HB55 503 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.94■□□□□ 0.462e-7■■■□□ 19.2
CDK5RAP3-230ENST00000584042 GDAP2Q9NXN4 497 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 PCDH10Q9P2E7 1040 aa17.94■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SOX5P35711 763 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 STAT1P42224 750 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CLCNKBP51801 687 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 RNASELQ05823 741 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 GOLGA8FQ08AF8 430 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 GOLGA8DPQ0D2H9 430 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 MEA1Q16626 185 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 WDR72Q3MJ13 1102 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CMTR2Q8IYT2 770 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TTC39CQ8N584 583 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CCDC112Q8NEF3 446 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ZNF689Q96CS4 500 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 FAM193BQ96PV7 902 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SLC9A7Q96T83 725 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ARID3AQ99856 593 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TMEM175Q9BSA9 504 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 KIAA1671Q9BY89 1806 aa17.93■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ZBBXA8MT70 800 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 B4GALT3O60512 393 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 UPP2O95045 317 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 FERP16591 822 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 LILRA4P59901 499 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ASIC2Q16515 512 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ARHGAP44Q17R89 818 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SFMBT2Q5VUG0 894 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 E4F1Q66K89 784 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SCARA5Q6ZMJ2 495 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 C3orf58Q8NDZ4 430 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ELMO3Q96BJ8 720 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 NRDE2Q9H7Z3 1164 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 AIPL1Q9NZN9 384 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 NXF1Q9UBU9 619 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 POLIQ9UNA4 740 aa17.92■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CARNS1A5YM72 827 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 KPNA7A9QM74 516 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 NRDCO43847 1150 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 DDHD2O94830 711 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CCDC172P0C7W6 258 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ACO1P21399 889 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 PRKCIP41743 596 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CDK17Q00537 523 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 INCA1Q0VD86 236 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 RASIP1Q5U651 963 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ZNF280BQ86YH2 543 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 LRRC8AQ8IWT6 810 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 FAM71AQ8IYT1 594 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TOP6BLQ8N6T0 577 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SMYD3Q9H7B4 428 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ZNHIT6Q9NWK9 470 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CACNG4Q9UBN1 327 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CNTN6Q9UQ52 1028 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ARHGEF37A1IGU5 675 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SPTLC1O15269 473 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 GJB5O95377 273 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ZNF132P52740 706 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 DCLRE1AQ6PJP8 1040 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 LIMS2Q7Z4I7 341 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TMEM139Q8IV31 216 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 PHOSPHO2Q8TCD6 241 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 PAAF1Q9BRP4 392 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SDCBP2Q9H190 292 aa17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CXXC1Q9P0U4 656 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-230ENST00000584042 FOXN3O00409 490 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TACC1O75410 805 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 B3GAT3O94766 335 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 KIF4AO95239 1232 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 FAM163BP0C2L3 166 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms