RNA–Protein interactions for RNA: ENST00000583559.1

PER1-215, Transcript of period circadian regulator 1, human

TSL 2

Gene PER1, Length 523 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PER1-215	ENST00000583559	HLA-DRA	P01903	254 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	GALT	P07902	379 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	BMPR1A	P36894	532 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	KCNQ1	P51787	676 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	AFF1	P51825	1210 aa	Known RBP	10.5	□□□□□ -0.73
PER1-215	ENST00000583559	YWHAE	P62258	255 aa	Known RBP	10.5	□□□□□ -0.73
PER1-215	ENST00000583559	PPP3CA	Q08209	521 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	UPP1	Q16831	310 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	EXOC3L4	Q17RC7	722 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	ZACN	Q401N2	412 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	IRF2BP1	Q8IU81	584 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	LRRC52	Q8N7C0	313 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	COLGALT1	Q8NBJ5	622 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	EHBP1	Q8NDI1	1231 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	GSTCD	Q8NEC7	633 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	APPL2	Q8NEU8	664 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	ZNF516	Q92618	1163 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	PLVAP	Q9BX97	442 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	TRIM5	Q9C035	493 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	RC3H2	Q9HBD1	1191 aa	Known RBP	10.5	□□□□□ -0.73
PER1-215	ENST00000583559	GOLGA2P5	Q9HBQ8	144 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	RAB20	Q9NX57	234 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	DNAJB4	Q9UDY4	337 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	ADAM28	Q9UKQ2	775 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	SSX2IP	Q9Y2D8	614 aa		10.5	□□□□□ -0.73
PER1-215	ENST00000583559	MRPL42	Q9Y6G3	142 aa	Known RBP	10.5	□□□□□ -0.73
PER1-215	ENST00000583559	GTPBP10	A4D1E9	387 aa	Known RBP	10.49	□□□□□ -0.73
PER1-215	ENST00000583559	LRRC10B	A6NIK2	292 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	KPNA7	A9QM74	516 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	PIR	O00625	290 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	PMM2	O15305	246 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	TPM1	P09493	284 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	LINC00271	P0C7V0	271 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	ODC1	P11926	461 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	ZNF18	P17022	549 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	SLC11A1	P49279	550 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	GUCY2F	P51841	1108 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	MYL6	P60660	151 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	MRPS5	P82675	430 aa	Known RBP	10.49	□□□□□ -0.73
PER1-215	ENST00000583559	DSC1	Q08554	894 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	WDR72	Q3MJ13	1102 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	TDRD10	Q5VZ19	366 aa	Known RBP	10.49	□□□□□ -0.73
PER1-215	ENST00000583559	PDXDC1	Q6P996	788 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	CEP57	Q86XR8	500 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	THEM5	Q8N1Q8	247 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	C1orf127	Q8N9H9	656 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	FBXO22	Q8NEZ5	403 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	PLEKHO2	Q8TD55	490 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	MICAL1	Q8TDZ2	1067 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	ADAMTS19	Q8TE59	1207 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	NT5C1B	Q96P26	610 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.49	□□□□□ -0.73
PER1-215	ENST00000583559	RBSN	Q9H1K0	784 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	CWH43	Q9H720	699 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	GCNT4	Q9P109	453 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	NXF1	Q9UBU9	619 aa	Known RBP	10.49	□□□□□ -0.73
PER1-215	ENST00000583559	DSE	Q9UL01	958 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	PLAGL2	Q9UPG8	496 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	SNX9	Q9Y5X1	595 aa		10.49	□□□□□ -0.73
PER1-215	ENST00000583559	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.49	□□□□□ -0.73	2e-9	■■■■■ 80.4
PER1-215	ENST00000583559	ANO9	A1A5B4	782 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	GOLGA6L6	A8MZA4	724 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559		H7C4K7	107 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	TMEM189-UBE2V1	I3L0A0	370 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CYB561D2	O14569	222 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CST3	P01034	146 aa	Predicted RBP	10.48	□□□□□ -0.73
PER1-215	ENST00000583559	ATP1A3	P13637	1013 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	TBXAS1	P24557	533 aa	Predicted RBP	10.48	□□□□□ -0.73
PER1-215	ENST00000583559	WNT7B	P56706	349 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	LILRA4	P59901	499 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	SOX4	Q06945	474 aa	Predicted RBP	10.48	□□□□□ -0.73
PER1-215	ENST00000583559	LRMP	Q12912	555 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	GPM6B	Q13491	265 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	SKIV2L	Q15477	1246 aa	Known RBP	10.48	□□□□□ -0.73
PER1-215	ENST00000583559	USP41	Q3LFD5	358 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CBWD6	Q4V339	395 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CBWD3	Q5JTY5	395 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CBWD5	Q5RIA9	395 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	FAM171A1	Q5VUB5	890 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	FUT10	Q6P4F1	479 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	DPH6	Q7L8W6	267 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	DRC7	Q8IY82	874 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	TTC39C	Q8N584	583 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	NEK11	Q8NG66	645 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	TAS1R2	Q8TE23	839 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	HASPIN	Q8TF76	798 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	RABGGTA	Q92696	567 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CLP1	Q92989	425 aa	Known RBP	10.48	□□□□□ -0.73
PER1-215	ENST00000583559	IGSF21	Q96ID5	467 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	SENP8	Q96LD8	212 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CRACR2A	Q9BSW2	395 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	CXCL16	Q9H2A7	254 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	SNX25	Q9H3E2	840 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	IFNK	Q9P0W0	207 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	NLRC5	Q86WI3	1866 aa		10.48	□□□□□ -0.73
PER1-215	ENST00000583559	LGALS16	A8MUM7	142 aa		10.47	□□□□□ -0.73
PER1-215	ENST00000583559	SYN3	O14994	580 aa		10.47	□□□□□ -0.73
PER1-215	ENST00000583559	MEFV	O15553	781 aa	Predicted RBP	10.47	□□□□□ -0.73
PER1-215	ENST00000583559	FGF18	O76093	207 aa		10.47	□□□□□ -0.73
PER1-215	ENST00000583559	KIF4A	O95239	1232 aa		10.47	□□□□□ -0.73

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