RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 MAP2K6P52564 334 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 VAV2P52735 878 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 SEC24CP53992 1094 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 USP14P54578 494 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 NOGQ13253 232 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 PGS1Q32NB8 556 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 CCDC93Q567U6 631 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 FAM90A1Q86YD7 464 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 SLC17A8Q8NDX2 589 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 HPS3Q969F9 1004 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 MVB12AQ96EY5 273 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 RTFDC1Q9BY42 306 aaPredicted RBP4.69□□□□□ -1.66
VAPA-206ENST00000583475 IMPG2Q9BZV3 1241 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 CTTNBP2NLQ9P2B4 639 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 MAST3O60307 1309 aa4.69□□□□□ -1.66
VAPA-206ENST00000583475 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
VAPA-206ENST00000583475 E9PLN8 166 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 DTNBO60941 627 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 ERN1O75460 977 aaKnown RBP4.68□□□□□ -1.66
VAPA-206ENST00000583475 RHOBTB3O94955 611 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 ARIH2O95376 493 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 ANXA1P04083 346 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 FTH1P19P0C7X4 201 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 BLOC1S1P78537 153 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 PIN1Q13526 163 aaPredicted RBP4.68□□□□□ -1.66
VAPA-206ENST00000583475 GEN1Q17RS7 908 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 ATAT1Q5SQI0 421 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 SP5Q6BEB4 398 aaPredicted RBP4.68□□□□□ -1.66
VAPA-206ENST00000583475 HEATR3Q7Z4Q2 680 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 PDSS2Q86YH6 399 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 CFAP52Q8N1V2 620 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 PDPRQ8NCN5 879 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 NSUN7Q8NE18 718 aaKnown RBP4.68□□□□□ -1.66
VAPA-206ENST00000583475 SUPT20HQ8NEM7 779 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 RGMAQ96B86 450 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 Q96MF0 132 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 VKORC1Q9BQB6 163 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 SLC12A5Q9H2X9 1139 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 ABCF2Q9UG63 623 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 CDYLQ9Y232 598 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 THRAP3Q9Y2W1 955 aaKnown RBP4.68□□□□□ -1.66
VAPA-206ENST00000583475 SALL3Q9BXA9 1300 aa4.68□□□□□ -1.66
VAPA-206ENST00000583475 PRAMEF33A0A0G2JMD5 474 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 A0A1W2PS29 197 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 E2F8A0AVK6 867 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 PRAMEF10O60809 474 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 SUN1O94901 812 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 MATN4O95460 622 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 ESRRBO95718 433 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 FTLP02792 175 aaPredicted RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 GJB1P08034 283 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 TYRP14679 529 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 KCNA2P16389 499 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 LPOP22079 712 aaPredicted RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 FDXRP22570 491 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 ADRA1BP35368 520 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 AVPR1BP47901 424 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 EPHB1P54762 984 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 POU6F2P78424 691 aaPredicted RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 ZNF844Q08AG5 666 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 TMPRSS9Q7Z410 1059 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 RAVER1Q8IY67 606 aaKnown RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 COLGALT2Q8IYK4 626 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 JPH3Q8WXH2 748 aaPredicted RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 SCAMP4Q969E2 229 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 CAVIN3Q969G5 261 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 PTCD3Q96EY7 689 aaKnown RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 CAMKK2Q96RR4 588 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 MRPL46Q9H2W6 279 aaKnown RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 WDCPQ9H6R7 721 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 BRD9Q9H8M2 597 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 GPR35Q9HC97 309 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 ALG13Q9NP73 1137 aaKnown RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 GNL3LQ9NVN8 582 aaKnown RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 TBCCD1Q9NVR7 557 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 RLIMQ9NVW2 624 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 C11orf21Q9P2W6 132 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 TESQ9UGI8 421 aaKnown RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 ZNF180Q9UJW8 692 aa4.67□□□□□ -1.66
VAPA-206ENST00000583475 PNMA8BQ9ULN7 279 aaPredicted RBP4.67□□□□□ -1.66
VAPA-206ENST00000583475 SUV39H1O43463 412 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 ALDH2P05091 517 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 GATA3P23771 443 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 PHKA1P46020 1223 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 PIK3CGP48736 1102 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 PSMC1P62191 440 aaKnown RBP4.66□□□□□ -1.66
VAPA-206ENST00000583475 NKX6-1P78426 367 aaPredicted RBP4.66□□□□□ -1.66
VAPA-206ENST00000583475 DYRK1AQ13627 763 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 HABP2Q14520 560 aaPredicted RBP4.66□□□□□ -1.66
VAPA-206ENST00000583475 ZNF267Q14586 743 aaPredicted RBP4.66□□□□□ -1.66
VAPA-206ENST00000583475 KIF22Q14807 665 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 PLEKHG6Q3KR16 790 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 CRB2Q5IJ48 1285 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 OLFML1Q6UWY5 402 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 CLNKQ7Z7G1 428 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 PPP1R3BQ86XI6 285 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 TPH2Q8IWU9 490 aa4.66□□□□□ -1.66
VAPA-206ENST00000583475 GRAMD1CQ8IYS0 662 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms