RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SLC5A1P13866 664 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 PHKG2P15735 406 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 ZNF135P52742 658 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 PUM1Q14671 1186 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 POLD3Q15054 466 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 METRNLQ641Q3 311 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 ZFPM1Q8IX07 1006 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 PALM2Q8IXS6 379 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 ANKS1AQ92625 1134 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 EDAQ92838 391 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 MARS2Q96GW9 593 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 KLHL32Q96NJ5 620 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 NEU1Q99519 415 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 NAA15Q9BXJ9 866 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 LRRC27Q9C0I9 530 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 CPNE7Q9UBL6 633 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 SORCS3Q9UPU3 1222 aa6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-219ENST00000583294 ANO9A1A5B4 782 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 TBX3O15119 743 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 ZNF185O15231 689 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 GNAI2P04899 355 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 BRAFP15056 766 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 SELENOPP49908 381 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 SUMO3P55854 103 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 UBE4AQ14139 1066 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 CRB2Q5IJ48 1285 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 FAM102AQ5T9C2 384 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 NAIF1Q69YI7 327 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 HTR3DQ70Z44 454 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 APIPQ96GX9 242 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 TBCBQ99426 244 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 TLR10Q9BXR5 811 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 TEX101Q9BY14 249 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 KLC2Q9H0B6 622 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 NUP62CLQ9H1M0 184 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 KIAA1586Q9HCI6 787 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 SMPD4Q9NXE4 827 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 AGAP1Q9UPQ3 857 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 CDYLQ9Y232 598 aa6.94□□□□□ -1.3
SMARCE1-219ENST00000583294 MYO1FO00160 1098 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 SCAF4O95104 1147 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 FCER1AP12319 257 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 GCSHP23434 173 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 ADAM17P78536 824 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 SLFN5Q08AF3 891 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 HDAC1Q13547 482 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 PRKD1Q15139 912 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 EMC10Q5UCC4 262 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 PDSS2Q86YH6 399 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 PDPRQ8NCN5 879 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 SCAMP4Q969E2 229 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 ZSWIM1Q9BR11 485 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 REXO4Q9GZR2 422 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 ZNF287Q9HBT7 754 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 SACM1LQ9NTJ5 587 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 RLIMQ9NVW2 624 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 TRPM5Q9NZQ8 1165 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 OGDHLQ9ULD0 1010 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 CORO2BQ9UQ03 480 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 SNX13Q9Y5W8 968 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 AATKQ6ZMQ8 1374 aa6.93□□□□□ -1.3
SMARCE1-219ENST00000583294 CCDC78A2IDD5 438 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 E9PLN8 166 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 MUSKO15146 869 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 FRS3O43559 492 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 PEX14O75381 377 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 UNC5CO95185 931 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 ANXA1P04083 346 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 ZKSCAN1P17029 563 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 PIK3CBP42338 1070 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 RHBDL3P58872 404 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 CNGA2Q16280 664 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 PDCD4Q53EL6 469 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 AGAP9Q5VTM2 703 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 USP37Q86T82 979 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 NSUN7Q8NE18 718 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 OR56A1Q8NGH5 318 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 OR6B3Q8NGW1 331 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 SVIPQ8NHG7 77 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 CPT1CQ8TCG5 803 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 NUP133Q8WUM0 1156 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 VKORC1Q9BQB6 163 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 TRIM54Q9BYV2 358 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 GPR35Q9HC97 309 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 MRPS18AQ9NVS2 196 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 SRRDQ9UH36 339 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 ATP11BQ9Y2G3 1177 aa6.92□□□□□ -1.3
SMARCE1-219ENST00000583294 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 RHPN2P1A8MT19 583 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 M0QYG6 137 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 FAM20BO75063 409 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 VPS4BO75351 444 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 KIF20AO95235 890 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 IFIT2P09913 472 aaKnown RBP6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 ACRV1P26436 265 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 FMO1Q01740 532 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 LONRF1Q17RB8 773 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 ZNF783Q6ZMS7 281 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms