RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SPTLC1O15269 473 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 CST3P01034 146 aaPredicted RBP21.59■■□□□ 1.05
TOP3A-213ENST00000582230 ATICP31939 592 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 IRS1P35568 1242 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 MYL5Q02045 173 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 PPP3CAQ08209 521 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 KIAA0319Q5VV43 1072 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 KRT39Q6A163 491 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 CEP57Q86XR8 500 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 TRIM59Q8IWR1 403 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 APPL2Q8NEU8 664 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 PPP2R3CQ969Q6 453 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 SLC35C1Q96A29 364 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 HPDLQ96IR7 371 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 CNOT6LQ96LI5 555 aaKnown RBP21.59■■□□□ 1.05
TOP3A-213ENST00000582230 MAGEC2Q9UBF1 373 aaPredicted RBP21.59■■□□□ 1.05
TOP3A-213ENST00000582230 PCDHB8Q9UN66 801 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 NFE2L3Q9Y4A8 694 aa21.59■■□□□ 1.05
TOP3A-213ENST00000582230 I3L4J1 428 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 STAU1O95793 577 aaKnown RBP21.58■■□□□ 1.05
TOP3A-213ENST00000582230 CAVIN2O95810 425 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 FOSL2P15408 326 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 CREMQ03060 361 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 NCOA4Q13772 614 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 PLPP4Q5VZY2 271 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 IRF2BP1Q8IU81 584 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 SENP8Q96LD8 212 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 NSUN3Q9H649 340 aaKnown RBP21.58■■□□□ 1.05
TOP3A-213ENST00000582230 GDAP2Q9NXN4 497 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 DSEQ9UL01 958 aa21.58■■□□□ 1.05
TOP3A-213ENST00000582230 LILRB3O75022 631 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 CSPG5O95196 566 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 ODC1P11926 461 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 TKTP29401 623 aaKnown RBP21.57■■□□□ 1.04
TOP3A-213ENST00000582230 MXI1P50539 228 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 PTPN14Q15678 1187 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 SGSM1Q2NKQ1 1148 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 RTP2Q5QGT7 225 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 ANKS3Q6ZW76 656 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 CREBRFQ8IUR6 639 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 RIN2Q8WYP3 895 aaPredicted RBP21.57■■□□□ 1.04
TOP3A-213ENST00000582230 PIK3R5Q8WYR1 880 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 TAF4BQ92750 862 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 B3GALT6Q96L58 329 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 MMRN2Q9H8L6 949 aa21.57■■□□□ 1.04
TOP3A-213ENST00000582230 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.57■■□□□ 1.04
TOP3A-213ENST00000582230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.57■■□□□ 1.04
TOP3A-213ENST00000582230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.56■■□□□ 1.04
TOP3A-213ENST00000582230 C2orf71A6NGG8 1288 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 SMTNL1A8MU46 457 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 C2CD2LO14523 706 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 CYB561D2O14569 222 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 N4BP1O75113 896 aaKnown RBP21.56■■□□□ 1.04
TOP3A-213ENST00000582230 VNN1O95497 513 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 TYMPP19971 482 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 CA8P35219 290 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 PIK3CAP42336 1068 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 ZNF165P49910 485 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 MYL6P60660 151 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 SCARA3Q6AZY7 606 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 EMILIN2Q9BXX0 1053 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 IMPG2Q9BZV3 1241 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 XYLT2Q9H1B5 865 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 VRTNQ9H8Y1 702 aa21.56■■□□□ 1.04
TOP3A-213ENST00000582230 COL4A4P53420 1690 aaPredicted RBP21.56■■□□□ 1.04
TOP3A-213ENST00000582230 H7C4K7 107 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 PMM2O15305 246 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 HLA-DRAP01903 254 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 EEF1GP26641 437 aaKnown RBP21.55■■□□□ 1.04
TOP3A-213ENST00000582230 MTIF2P46199 727 aaKnown RBP21.55■■□□□ 1.04
TOP3A-213ENST00000582230 CETN1Q12798 172 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 METTL23Q86XA0 190 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 CCDC150Q8NCX0 1101 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 FBXL13Q8NEE6 735 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 LNX1Q8TBB1 728 aaPredicted RBP21.55■■□□□ 1.04
TOP3A-213ENST00000582230 TAS1R2Q8TE23 839 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 AUTS2Q8WXX7 1259 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 OXCT2Q9BYC2 517 aaPredicted RBP21.55■■□□□ 1.04
TOP3A-213ENST00000582230 RXFP1Q9HBX9 757 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 SAMSN1Q9NSI8 373 aaKnown RBP21.55■■□□□ 1.04
TOP3A-213ENST00000582230 FNIP2Q9P278 1114 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 COQ4Q9Y3A0 265 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 PCDHGC5Q9Y5F6 944 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 SNX9Q9Y5X1 595 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 PLXNA4Q9HCM2 1894 aa21.55■■□□□ 1.04
TOP3A-213ENST00000582230 CHD7Q9P2D1 2997 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 FSD2A1L4K1 749 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 HIDE1A8MVS5 230 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 P4HA2O15460 535 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 HUS1O60921 280 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 CYP11A1P05108 521 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 FMO5P49326 533 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 YWHAHQ04917 246 aaPredicted RBP21.54■■□□□ 1.04
TOP3A-213ENST00000582230 KCNH2Q12809 1159 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 ZNF699Q32M78 642 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 CBWD6Q4V339 395 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 CBWD3Q5JTY5 395 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 CBWD5Q5RIA9 395 aa21.54■■□□□ 1.04
TOP3A-213ENST00000582230 VARS2Q5ST30 1063 aaKnown RBP21.54■■□□□ 1.04
TOP3A-213ENST00000582230 CDKAL1Q5VV42 579 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms