RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NCK2O43639 380 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 ALDH2P05091 517 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 CYP3A5P20815 502 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 RBM10P98175 930 aaKnown RBP14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 FKBP3Q00688 224 aaKnown RBP14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 TCP11X2Q5H9J9 407 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 CEP135Q66GS9 1140 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 BMP8AQ7Z5Y6 402 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 ZNF280BQ86YH2 543 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 CBWD2Q8IUF1 395 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 COLGALT2Q8IYK4 626 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 PBXIP1Q96AQ6 731 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 DDX27Q96GQ7 796 aaKnown RBP14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 MKNK1Q9BUB5 465 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 LMAN2LQ9H0V9 348 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 SAMSN1Q9NSI8 373 aaKnown RBP14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 MIOSQ9NXC5 875 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 SPG21Q9NZD8 308 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 PLAGL2Q9UPG8 496 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 ITIH6Q6UXX5 1313 aa14.56□□□□□ -0.08
CSNK1D-220ENST00000581737 SLC16A3O15427 465 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 DDHD2O94830 711 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 GLP2RO95838 553 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 GALTP07902 379 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 EPB41P11171 864 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 RPL9P32969 192 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 PSMC2P35998 433 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 OR1G1P47890 313 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 SLC11A1P49279 550 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 VCPP55072 806 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 KRT17Q04695 432 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 ENPEPQ07075 957 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 CYP24A1Q07973 514 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 ADAM9Q13443 819 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 PSMD6Q15008 389 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 FKBP15Q5T1M5 1219 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 JADE1Q6IE81 842 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 LRRC8AQ8IWT6 810 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 CACTINQ8WUQ7 758 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 TMEM169Q96HH4 297 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 CEP63Q96MT8 703 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 ZMAT2Q96NC0 199 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 FNBP1Q96RU3 617 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 COLEC11Q9BWP8 271 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 HCSTQ9UBK5 93 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 DNAJB4Q9UDY4 337 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 FAN1Q9Y2M0 1017 aa14.55□□□□□ -0.08
CSNK1D-220ENST00000581737 DCHS1Q96JQ0 3298 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 LOC730098B7Z3J9 87 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 TULP1O00294 542 aaPredicted RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 MEFVO15553 781 aaPredicted RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 ITGB1P05556 798 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 NFICP08651 508 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 KRT13P13646 458 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 MTIF2P46199 727 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 COPB1P53618 953 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 ZXDAP98168 799 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 UBE3AQ05086 875 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 NAB2Q15742 525 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 ZBTB6Q15916 424 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 ANKRD40Q6AI12 368 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 TTI2Q6NXR4 508 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 INTS8Q75QN2 995 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 WDR49Q8IV35 697 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 CNGA4Q8IV77 575 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 ZC3H3Q8IXZ2 948 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 FAM186BQ8IYM0 893 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 SLC39A11Q8N1S5 342 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 RDH13Q8NBN7 331 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 ZSWIM2Q8NEG5 633 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 SPPL3Q8TCT6 385 aa14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 POP1Q99575 1024 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 SRRTQ9BXP5 876 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 PRG3Q9Y2Y8 225 aaPredicted RBP14.54□□□□□ -0.08
CSNK1D-220ENST00000581737 VPS13AQ96RL7 3174 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 TRIM49BA6NDI0 452 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 CASTOR2A6NHX0 329 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 LRRC10BA6NIK2 292 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 TMEM189-UBE2V1I3L0A0 370 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 NRP1O14786 923 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 B4GALT3O60512 393 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 FGF18O76093 207 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 TNNC2P02585 160 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 TMEM191BP0C7N4 346 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 PAX3P23760 479 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 NDUFV1P49821 464 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 AP3M2P53677 418 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 PMS1P54277 932 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 PTPN5P54829 565 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 TFAMQ00059 246 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 PLCB3Q01970 1234 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 NR1I3Q14994 352 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 KRT31Q15323 416 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 DUOXA2Q1HG44 320 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 RBM23Q86U06 439 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms