RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 C1QTNF1Q9BXJ1 281 aa10.57□□□□□ -0.72
TOP3A-211ENST00000581536 SMOC2Q9H3U7 446 aa10.57□□□□□ -0.72
TOP3A-211ENST00000581536 MRPL44Q9H9J2 332 aaKnown RBP10.57□□□□□ -0.72
TOP3A-211ENST00000581536 PANK4Q9NVE7 773 aa10.57□□□□□ -0.72
TOP3A-211ENST00000581536 RCOR1Q9UKL0 485 aa10.57□□□□□ -0.72
TOP3A-211ENST00000581536 TMEM189-UBE2V1I3L0A0 370 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 PPEF2O14830 753 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 POLR2DO15514 142 aaKnown RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 N4BP1O75113 896 aaKnown RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 PRPF6O94906 941 aaKnown RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 ADRB2P07550 413 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 CLTAP09496 248 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 JUNDP17535 347 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 RPL9P32969 192 aaKnown RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 QPCTQ16769 361 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 ADALQ6DHV7 355 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 CRELD2Q6UXH1 353 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 MAP4K3Q8IVH8 894 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 EDAQ92838 391 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 RIPOR3Q96MK2 946 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 UROC1Q96N76 676 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 ST6GALNAC4Q9H4F1 302 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 SFXN1Q9H9B4 322 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 RPF1Q9H9Y2 349 aaKnown RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 PRDM9Q9NQV7 894 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 SLC38A7Q9NVC3 462 aa10.56□□□□□ -0.72
TOP3A-211ENST00000581536 CPSF3Q9UKF6 684 aaKnown RBP10.56□□□□□ -0.72
TOP3A-211ENST00000581536 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 GCNT3O95395 438 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 ASGR2P07307 311 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 ME1P48163 572 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 WNT7BP56706 349 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 NTHL1P78549 312 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 ZXDAP98168 799 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 MRPL58Q14197 206 aaKnown RBP10.55□□□□□ -0.72
TOP3A-211ENST00000581536 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-211ENST00000581536 GPR65Q8IYL9 337 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 GRAMD1CQ8IYS0 662 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 SMG7Q92540 1137 aaKnown RBP10.55□□□□□ -0.72
TOP3A-211ENST00000581536 NECTIN4Q96NY8 510 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 PCIF1Q9H4Z3 704 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 PLEKHA5Q9HAU0 1116 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 KBTBD4Q9NVX7 518 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 AGO2Q9UKV8 859 aaKnown RBP10.55□□□□□ -0.72
TOP3A-211ENST00000581536 TIMM13Q9Y5L4 95 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-211ENST00000581536 CDY1Q9Y6F8 540 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 STYXL1Q9Y6J8 313 aa10.55□□□□□ -0.72
TOP3A-211ENST00000581536 GOLGA8IPA6NC78 632 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 GOLGA8JA6NMD2 632 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 CCL16O15467 120 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 TRAPPC3O43617 180 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 TBC1D4O60343 1298 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 NFICP08651 508 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 GAP43P17677 238 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 HOXD13P35453 343 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 AFMP43652 599 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 CDR1P51861 262 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 ARPP19P56211 112 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 ELAVL2Q12926 359 aaKnown RBP10.54□□□□□ -0.72
TOP3A-211ENST00000581536 RAB33AQ14088 237 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 L1TD1Q5T7N2 865 aaKnown RBP10.54□□□□□ -0.72
TOP3A-211ENST00000581536 RESP18Q5W5W9 173 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 C15orf39Q6ZRI6 1047 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 HFE2Q6ZVN8 426 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 HDAC7Q8WUI4 952 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 POMGNT1Q8WZA1 660 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 SAAL1Q96ER3 474 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 FAM84AQ96KN4 292 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 ACCSQ96QU6 501 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 PRKD2Q9BZL6 878 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 BLZF1Q9H2G9 400 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 PLEKHA4Q9H4M7 779 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 PIDD1Q9HB75 910 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 MTRRQ9UBK8 725 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 SEL1LQ9UBV2 794 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 NR2E1Q9Y466 385 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 NUB1Q9Y5A7 615 aa10.54□□□□□ -0.72
TOP3A-211ENST00000581536 A0A1B0GVL5 298 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 WDR27A2RRH5 827 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 SEC24AO95486 1093 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 PDIA4P13667 645 aaKnown RBP10.53□□□□□ -0.72
TOP3A-211ENST00000581536 LRPAP1P30533 357 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 MCM4P33991 863 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 PPP2R3AQ06190 1150 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 CUL4BQ13620 913 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 PTPN21Q16825 1174 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 SPATA1Q5VX52 437 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 SLFN12LQ6IEE8 588 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 TRIM67Q6ZTA4 783 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 GRASPQ7Z6J2 395 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-211ENST00000581536 CCDC65Q8IXS2 484 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 ZDHHC14Q8IZN3 488 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 SYCP3Q8IZU3 236 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 IQUBQ8NA54 791 aa10.53□□□□□ -0.72
TOP3A-211ENST00000581536 CMASQ8NFW8 434 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-211ENST00000581536 RSAD2Q8WXG1 361 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms