RNA–Protein interactions for RNA: ENST00000580976.1

RHOT1-208, Transcript of ras homolog family member T1, human

TSL 4

Gene RHOT1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-208	ENST00000580976	TDRD9	Q8NDG6	1382 aa	Known RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	CCDC196	A0A1B0GTZ2	297 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	TEX51	A0A1B0GUA7	166 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976		A0A1W2PPH5	198 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	FSD2	A1L4K1	749 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	PRAMEF25	A6NGN4	478 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	AQP12B	A6NM10	295 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	TRIM38	O00635	465 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	ZBED4	O75132	1171 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	URI1	O94763	535 aa	Predicted RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	SGPL1	O95470	568 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	IGFBP6	P24592	240 aa	Predicted RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	MC4R	P32245	332 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	STAT1	P42224	750 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	TLE1	Q04724	770 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	CHRND	Q07001	517 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	PPARA	Q07869	468 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	CACNB2	Q08289	660 aa	Predicted RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	DBP	Q10586	325 aa	Predicted RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	MAPK7	Q13164	816 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	TRPC3	Q13507	836 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	RAB39A	Q14964	217 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	C3orf38	Q5JPI3	329 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	LIPI	Q6XZB0	460 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	BBS12	Q6ZW61	710 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	KRT74	Q7RTS7	529 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	ZSCAN30	Q86W11	494 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	FAM90A1	Q86YD7	464 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	CREBRF	Q8IUR6	639 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	NRSN1	Q8IZ57	195 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	TRMT2A	Q8IZ69	625 aa	Known RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	CDYL2	Q8N8U2	506 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	GLIS1	Q8NBF1	620 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	IFI44	Q8TCB0	444 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	STYX	Q8WUJ0	223 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	ERCC4	Q92889	916 aa	Predicted RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	RILPL2	Q969X0	211 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	RRP36	Q96EU6	259 aa	Known RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	TOE1	Q96GM8	510 aa	Known RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	ZMAT2	Q96NC0	199 aa	Known RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	RSF1	Q96T23	1441 aa	Predicted RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	P2RX7	Q99572	595 aa	Known RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	AP1M1	Q9BXS5	423 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	CCDC68	Q9H2F9	335 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	GHITM	Q9H3K2	345 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	SAYSD1	Q9NPB0	183 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.93	□□□□□ -1.62	9e-7	■□□□□ 9.3
RHOT1-208	ENST00000580976	AASS	Q9UDR5	926 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	FEM1B	Q9UK73	627 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	SCAF8	Q9UPN6	1271 aa	Known RBP	4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	MED16	Q9Y2X0	877 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976	PCDHB6	Q9Y5E3	794 aa		4.93	□□□□□ -1.62
RHOT1-208	ENST00000580976		A0A0A6YYK5	440 aa	Predicted RBP	4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	PRAMEF22	A3QJZ6	481 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	PAX4	O43316	350 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	DOK2	O60496	412 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	TIPRL	O75663	272 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	PCDH8	O95206	1070 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	RARB	P10826	455 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	ALOX15	P16050	662 aa	Predicted RBP	4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	MAL	P21145	153 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	UBA7	P41226	1012 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	RGS3	P49796	1198 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	SEC24C	P53992	1094 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	DRG2	P55039	364 aa	Known RBP	4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	MESP2	Q0VG99	397 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.92	□□□□□ -1.62	9e-6	■□□□□ 9.6
RHOT1-208	ENST00000580976	TRIM71	Q2Q1W2	868 aa	Known RBP	4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	CCDC157	Q569K6	752 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	FAM26F	Q5R3K3	315 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	PRAMEF18	Q5VWM3	479 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	KIAA1614	Q5VZ46	1190 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	CD276	Q5ZPR3	534 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	OLFML2B	Q68BL8	750 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	CIAPIN1	Q6FI81	312 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	PPP1R3B	Q86XI6	285 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	SMARCC2	Q8TAQ2	1214 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	CREB3L4	Q8TEY5	395 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	MZB1	Q8WU39	189 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	CPA5	Q8WXQ8	436 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	THAP4	Q8WY91	577 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	HVCN1	Q96D96	273 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	IQCD	Q96DY2	449 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	NOX5	Q96PH1	765 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	SOX7	Q9BT81	388 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	AMN	Q9BXJ7	453 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	MRPL46	Q9H2W6	279 aa	Known RBP	4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	MTG2	Q9H4K7	406 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	BRD9	Q9H8M2	597 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	SIRT5	Q9NXA8	310 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	FAM53C	Q9NYF3	392 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	ABCF2	Q9UG63	623 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	HERC5	Q9UII4	1024 aa	Known RBP	4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	ACAD8	Q9UKU7	415 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976	RUSC2	Q8N2Y8	1516 aa		4.92	□□□□□ -1.62
RHOT1-208	ENST00000580976		A0A1W2PR48	441 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	THAP12	O43422	761 aa		4.91	□□□□□ -1.62
RHOT1-208	ENST00000580976	CUTA	O60888	179 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms