RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 CASTOR2A6NHX0 329 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 RNF225M0QZC1 329 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 DGKIO75912 1065 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 FECHP22830 423 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 HNRNPH3P31942 346 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 AARSP49588 968 aaKnown RBP eCLIP17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 GATMP50440 423 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 EPHB4P54760 987 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ADKP55263 362 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 YWHAEP62258 255 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TNNC1P63316 161 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 DRAP1Q14919 205 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ZNF365Q70YC5 407 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 RRAGAQ7L523 313 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 COLGALT2Q8IYK4 626 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 UBR7Q8N806 425 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 OR8K1Q8NGG5 319 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 KAT5Q92993 513 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.469e-16■□□□□ 8.9
CDK5RAP3-215ENST00000579780 GPR88Q9GZN0 384 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 MTIF3Q9H2K0 278 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CYP3A43Q9HB55 503 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.94■□□□□ 0.462e-7■■■□□ 19.2
CDK5RAP3-215ENST00000579780 GDAP2Q9NXN4 497 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 PCDH10Q9P2E7 1040 aa17.94■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SOX5P35711 763 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 STAT1P42224 750 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CLCNKBP51801 687 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 RNASELQ05823 741 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 GOLGA8FQ08AF8 430 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 GOLGA8DPQ0D2H9 430 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 MEA1Q16626 185 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 WDR72Q3MJ13 1102 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CMTR2Q8IYT2 770 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TTC39CQ8N584 583 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CCDC112Q8NEF3 446 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ZNF689Q96CS4 500 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 FAM193BQ96PV7 902 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SLC9A7Q96T83 725 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ARID3AQ99856 593 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TMEM175Q9BSA9 504 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 KIAA1671Q9BY89 1806 aa17.93■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ZBBXA8MT70 800 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 B4GALT3O60512 393 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 UPP2O95045 317 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 FERP16591 822 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 LILRA4P59901 499 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ASIC2Q16515 512 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ARHGAP44Q17R89 818 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SFMBT2Q5VUG0 894 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 E4F1Q66K89 784 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SCARA5Q6ZMJ2 495 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 C3orf58Q8NDZ4 430 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ELMO3Q96BJ8 720 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 NRDE2Q9H7Z3 1164 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 AIPL1Q9NZN9 384 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 NXF1Q9UBU9 619 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 POLIQ9UNA4 740 aa17.92■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CARNS1A5YM72 827 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 KPNA7A9QM74 516 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 NRDCO43847 1150 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 DDHD2O94830 711 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CCDC172P0C7W6 258 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ACO1P21399 889 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 PRKCIP41743 596 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CDK17Q00537 523 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 INCA1Q0VD86 236 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 RASIP1Q5U651 963 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ZNF280BQ86YH2 543 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 LRRC8AQ8IWT6 810 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 FAM71AQ8IYT1 594 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TOP6BLQ8N6T0 577 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SMYD3Q9H7B4 428 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ZNHIT6Q9NWK9 470 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CACNG4Q9UBN1 327 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CNTN6Q9UQ52 1028 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ARHGEF37A1IGU5 675 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SPTLC1O15269 473 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 GJB5O95377 273 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 ZNF132P52740 706 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 DCLRE1AQ6PJP8 1040 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 LIMS2Q7Z4I7 341 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 TMEM139Q8IV31 216 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 PHOSPHO2Q8TCD6 241 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 PAAF1Q9BRP4 392 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 SDCBP2Q9H190 292 aa17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 CXXC1Q9P0U4 656 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-215ENST00000579780 FOXN3O00409 490 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-215ENST00000579780 TACC1O75410 805 aa17.89■□□□□ 0.45
CDK5RAP3-215ENST00000579780 B3GAT3O94766 335 aa17.89■□□□□ 0.45
CDK5RAP3-215ENST00000579780 KIF4AO95239 1232 aa17.89■□□□□ 0.45
CDK5RAP3-215ENST00000579780 FAM163BP0C2L3 166 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms