RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 MAPRE1Q15691 268 aaKnown RBP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 ZKSCAN4Q969J2 545 aaPredicted RBP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 NCLNQ969V3 563 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 TSSK1BQ9BXA7 367 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 OSBPL8Q9BZF1 889 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 MTFR1LQ9H019 292 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 NOP53Q9NZM5 478 aaKnown RBP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 FAM205AQ6ZU69 1335 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 ATP9BO43861 1147 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 PDGFRBP09619 1106 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 SLC26A2P50443 739 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 CASP7P55210 303 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 FASTKD1Q53R41 847 aaKnown RBP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 MS4A14Q96JA4 679 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 RBM15Q96T37 977 aaKnown RBP eCLIP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 TRABDQ9H4I3 376 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 GTF3C4Q9UKN8 822 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 ZC3H4Q9UPT8 1303 aaKnown RBP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 OGTO15294 1046 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 PPFIA2O75334 1257 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 MYO1DO94832 1006 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 DDX5P17844 614 aaKnown RBP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 GNL1P36915 607 aaPredicted RBP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 GYS2P54840 703 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 EFTUD2Q15029 972 aaKnown RBP eCLIP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 SLC13A1Q9BZW2 595 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 WWP1Q9H0M0 922 aa15.96■□□□□ 0.15
ITGB4-206ENST00000579662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.96■□□□□ 0.15
ITGB4-206ENST00000579662 MAP2P11137 1827 aaKnown RBP15.96■□□□□ 0.14
ITGB4-206ENST00000579662 CDH16O75309 829 aa15.96■□□□□ 0.14
ITGB4-206ENST00000579662 ANP32DO95626 131 aa15.96■□□□□ 0.14
ITGB4-206ENST00000579662 KITP10721 976 aa15.96■□□□□ 0.14
ITGB4-206ENST00000579662 NRBF2Q96F24 287 aa15.96■□□□□ 0.14
ITGB4-206ENST00000579662 FRMD8P1Q9BZ68 369 aaPredicted RBP15.96■□□□□ 0.14
ITGB4-206ENST00000579662 SUDS3Q9H7L9 328 aaPredicted RBP15.96■□□□□ 0.14
ITGB4-206ENST00000579662 KBTBD4Q9NVX7 518 aa15.96■□□□□ 0.14
ITGB4-206ENST00000579662 MORC2Q9Y6X9 1032 aaPredicted RBP15.96■□□□□ 0.14
ITGB4-206ENST00000579662 DIAPH2O60879 1101 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 RNF180Q86T96 592 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 THOC1Q96FV9 657 aaKnown RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 NDFIP2Q9NV92 336 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 FBXO28Q9NVF7 368 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 PSMC3IPQ9P2W1 217 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 FAF1Q9UNN5 650 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 FKBP1AP62942 108 aaKnown RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 TMEM62Q0P6H9 643 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 ACAD10Q6JQN1 1059 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 ANGPTL8Q6UXH0 198 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 YAF2Q8IY57 180 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 AGXT2Q9BYV1 514 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 FRMD8Q9BZ67 464 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 KRT82Q9NSB4 513 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 XPO7Q9UIA9 1087 aaKnown RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 KIAA1257Q9ULG3 409 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 PLEKHH3Q7Z736 793 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 DNAJC7Q99615 494 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 PRDM5Q9NQX1 630 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 ZC3H7BQ9UGR2 993 aaKnown RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 NEU2Q9Y3R4 380 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 HADHAP40939 763 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 PDCD2Q16342 344 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 ANKMY2Q8IV38 441 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 ANKS1AQ92625 1134 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 TRIM51Q9BSJ1 452 aa15.95■□□□□ 0.14
ITGB4-206ENST00000579662 TRIM45Q9H8W5 580 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.95■□□□□ 0.14
ITGB4-206ENST00000579662 SESN2P58004 480 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 MYBPC2Q14324 1141 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 GRAMD1BQ3KR37 738 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 FIGNQ5HY92 759 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 CCNI2Q6ZMN8 369 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 JAMLQ86YT9 394 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 SCFD1Q8WVM8 642 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 IRX2Q9BZI1 471 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 TRIM4Q9C037 500 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 RAB6BQ9NRW1 208 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 HNRNPCL1O60812 293 aaKnown RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 INPP1P49441 399 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 CACNB2Q08289 660 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 AGBL2Q5U5Z8 902 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 MMGT1Q8N4V1 131 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 USP38Q8NB14 1042 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 DPP3Q9NY33 737 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 ALG6Q9Y672 507 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 CFAP73A6NFT4 308 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 PSTPIP1O43586 416 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 ODC1P11926 461 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 KLK7P49862 253 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 HABP4Q5JVS0 413 aaKnown RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 GNASQ5JWF2 1037 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 DNERQ8NFT8 737 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 CLMNQ96JQ2 1002 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 ROPN1BQ9BZX4 212 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 ROPN1Q9HAT0 212 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-206ENST00000579662 PXMP2Q9NR77 195 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 APRTP07741 180 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 WEE2P0C1S8 567 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 GIT2Q14161 759 aa15.94■□□□□ 0.14
ITGB4-206ENST00000579662 RBBP7Q16576 425 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms