RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 CSGALNACT1Q8TDX6 532 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 NTPCRQ9BSD7 190 aaKnown RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 RUSC1Q9BVN2 902 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 TIPINQ9BVW5 301 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 OXCT2Q9BYC2 517 aaPredicted RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 SLITRK6Q9H5Y7 841 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 C8orf33Q9H7E9 229 aaPredicted RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 NOL7Q9UMY1 257 aaKnown RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 YIPF1Q9Y548 306 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 SPTBN2O15020 2390 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 COL4A2P08572 1712 aa9.34□□□□□ -0.92
CASC3-206ENST00000579238 NCANO14594 1321 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 E9PMD0 336 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 M0QZQ0 153 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 SLC30A4O14863 429 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 CHADO15335 359 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 SLC16A4O15374 487 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 TOM1L1O75674 476 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 KRT37O76014 449 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 OAZ2O95190 189 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 PAPSS2O95340 614 aaPredicted RBP9.33□□□□□ -0.92
CASC3-206ENST00000579238 ADRB1P08588 477 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 LRPAP1P30533 357 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 CNR2P34972 360 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 STRN3Q13033 797 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 PTGDRQ13258 359 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 PLD1Q13393 1074 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 GNL2Q13823 731 aaKnown RBP9.33□□□□□ -0.92
CASC3-206ENST00000579238 SIM2Q14190 667 aaPredicted RBP9.33□□□□□ -0.92
CASC3-206ENST00000579238 LRRC32Q14392 662 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 GAS6Q14393 721 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 NOLC1Q14978 699 aaKnown RBP eCLIP9.33□□□□□ -0.92
CASC3-206ENST00000579238 KRT79Q5XKE5 535 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 RINT1Q6NUQ1 792 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 C1orf186Q6ZWK4 172 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 TMC8Q8IU68 726 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 FBXO18Q8NFZ0 1043 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 SPIRE2Q8WWL2 714 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 ZBTB45Q96K62 511 aaPredicted RBP9.33□□□□□ -0.92
CASC3-206ENST00000579238 LLPHQ9BRT6 129 aaKnown RBP9.33□□□□□ -0.92
CASC3-206ENST00000579238 LRRC3Q9BY71 257 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 PLEKHA5Q9HAU0 1116 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 TUBGCP4Q9UGJ1 667 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 KCNG1Q9UIX4 513 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 LIMCH1Q9UPQ0 1083 aa9.33□□□□□ -0.92
CASC3-206ENST00000579238 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.33□□□□□ -0.92
CASC3-206ENST00000579238 CITO14578 2027 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.32□□□□□ -0.92
CASC3-206ENST00000579238 A0A1W2PRU2 124 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 MYBPHLA2RUH7 354 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 OR6C75A6NL08 312 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 SFI1A8K8P3 1242 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 CHURC1-FNTBB4DL54 471 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 LAD1O00515 517 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 CLDN3O15551 220 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 HRO43593 1189 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 FOXD2O60548 495 aaPredicted RBP9.32□□□□□ -0.92
CASC3-206ENST00000579238 VNN2O95498 520 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 GUCY2CP25092 1073 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 ALDH1A3P47895 512 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 FNTBP49356 437 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 AARSP49588 968 aaKnown RBP eCLIP9.32□□□□□ -0.92
CASC3-206ENST00000579238 KPNA1P52294 538 aaPredicted RBP9.32□□□□□ -0.92
CASC3-206ENST00000579238 EPHB3P54753 998 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 HMGN5P82970 282 aaKnown RBP9.32□□□□□ -0.92
CASC3-206ENST00000579238 MCL1Q07820 350 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 FCHO2Q0JRZ9 810 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 DUSP4Q13115 394 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 NBR1Q14596 966 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 CSRP2Q16527 193 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 SEZ6Q53EL9 994 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 DGKKQ5KSL6 1271 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 ZPBP2Q6X784 338 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 PRR23CQ6ZRP0 262 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 USP37Q86T82 979 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 LONP2Q86WA8 852 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 ARID3BQ8IVW6 561 aaPredicted RBP9.32□□□□□ -0.92
CASC3-206ENST00000579238 CCDC83Q8IWF9 413 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 TMEM161BQ8NDZ6 487 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 RSPRY1Q96DX4 576 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 PGLYRP2Q96PD5 576 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 DNAJC25Q9H1X3 360 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 SEMA4GQ9NTN9 838 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 ANKFY1Q9P2R3 1169 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 ASB3Q9Y575 518 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 TICRRQ7Z2Z1 1910 aa9.32□□□□□ -0.92
CASC3-206ENST00000579238 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 SLC38A8A6NNN8 435 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 PP2D1A8MPX8 630 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 SPECC1L-ADORA2AF8WAN1 911 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 K7ESF4 209 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 EIF5BO60841 1220 aaKnown RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 FGF19O95750 216 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 CLTAP09496 248 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 OR4Q2P0C623 313 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 CXCL8P10145 99 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 MAPTP10636 758 aaKnown RBP9.31□□□□□ -0.92
CASC3-206ENST00000579238 PLS3P13797 630 aa9.31□□□□□ -0.92
CASC3-206ENST00000579238 TYMPP19971 482 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms