RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 C15orf39Q6ZRI6 1047 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 EPM2AIP1Q7L775 607 aaPredicted RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 NT5DC4Q86YG4 428 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CBWD2Q8IUF1 395 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 ELMOD1Q8N336 334 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 PLCD3Q8N3E9 789 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 TDRD5Q8NAT2 981 aaKnown RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 SLC7A14Q8TBB6 771 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 SCFD1Q8WVM8 642 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 SUSD6Q92537 303 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 ANKRD36BP1Q96IX9 119 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 SENP8Q96LD8 212 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 OXCT2Q9BYC2 517 aaPredicted RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 PRKD2Q9BZL6 878 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 POMKQ9H5K3 350 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 EPHX3Q9H6B9 360 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CYP4F11Q9HBI6 524 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 AGPAT3Q9NRZ7 376 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 RMND1Q9NWS8 449 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 ZDHHC7Q9NXF8 308 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CHMP5Q9NZZ3 219 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CGNQ9P2M7 1197 aaKnown RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 MTRRQ9UBK8 725 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 LIMD1Q9UGP4 676 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CDH22Q9UJ99 828 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 FBXL5Q9UKA1 691 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 DSEQ9UL01 958 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CIZ1Q9ULV3 898 aaPredicted RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 MAPK8IP1Q9UQF2 711 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 FRMD4BQ9Y2L6 1034 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 UBE4BO95155 1302 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 FNDC1Q4ZHG4 1894 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 COL4A4P53420 1690 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 ARID2Q68CP9 1835 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 C19orf67A6NJJ6 358 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 OR6C75A6NL08 312 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 KPNA7A9QM74 516 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 LOC730098B7Z3J9 87 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 M0QZQ0 153 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 PIRO00625 290 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 CCL16O15467 120 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 TGFB1I1O43294 461 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 CALUO43852 315 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 KINO60870 393 aaKnown RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 PRPF40AO75400 957 aaKnown RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 OAZ2O95190 189 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 ITGB3P05106 788 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 RPL13P26373 211 aaKnown RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 POLR2BP30876 1174 aaKnown RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 HOXD13P35453 343 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 FAM160A1Q05DH4 1040 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 ADCY1Q08828 1119 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 TRPC3Q13507 836 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 TAF12Q16514 161 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 TMEM31Q5JXX7 168 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 TPGS2Q68CL5 300 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 LMBRD2Q68DH5 695 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 IQCEQ6IPM2 695 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 SLC8B1Q6J4K2 584 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 RSPO2Q6UXX9 243 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 RTL10Q7L3V2 364 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 GRASPQ7Z6J2 395 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 BRSK2Q8IWQ3 736 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 ZSWIM2Q8NEG5 633 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 CMASQ8NFW8 434 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 ZNF512Q96ME7 567 aaPredicted RBP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 ZNF560Q96MR9 790 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 MMS19Q96T76 1030 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 GOLPH3LQ9H4A5 285 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRAF4-213ENST00000578917 MUTYHQ9UIF7 546 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 ITGA11Q9UKX5 1188 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 RALGAPA2Q2PPJ7 1873 aa7.07□□□□□ -1.28
TRAF4-213ENST00000578917 FAM237AA0A1B0GTK4 181 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 ANO9A1A5B4 782 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 C2CD4DB7Z1M9 353 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 PI4K2BG5E9Z4 385 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 PDXKO00764 312 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 PPEF2O14830 753 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 SPTLC1O15269 473 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 KLRC4O43908 158 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 PRR29P0C7W0 189 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 ATF2P15336 505 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 PTPN2P17706 415 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 TYMPP19971 482 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 FSHRP23945 695 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 ALDH1A3P47895 512 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 CDR1P51861 262 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 ROR1Q01973 937 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 DPYDQ12882 1025 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 BIRC3Q13489 604 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 PNOCQ13519 176 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 MRPL58Q14197 206 aaKnown RBP7.06□□□□□ -1.28
TRAF4-213ENST00000578917 BMT2Q1RMZ1 405 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 CYP4A22Q5TCH4 519 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 WSCD1Q658N2 575 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 CEP135Q66GS9 1140 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 GET4Q7L5D6 327 aaPredicted RBP7.06□□□□□ -1.28
TRAF4-213ENST00000578917 WDR49Q8IV35 697 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms