RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	TTC4	O95801	387 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	FDX1	P10109	184 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	RPA3	P35244	121 aa	Predicted RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	GDF10	P55107	478 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	MYL6	P60660	151 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	NPNT	Q6UXI9	565 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	AEBP2	Q6ZN18	517 aa	Predicted RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	TAOK1	Q7L7X3	1001 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	SUGP1	Q8IWZ8	645 aa	Known RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	IFT74	Q96LB3	600 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	NLRP4	Q96MN2	994 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	NPHS2	Q9NP85	383 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	PCYOX1	Q9UHG3	505 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	POLI	Q9UNA4	740 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	AGT	P01019	485 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	KIT	P10721	976 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	MAGEA4	P43358	317 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	BASP1	P80723	227 aa	Known RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	OGDH	Q02218	1023 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	GJC2	Q5T442	439 aa	Predicted RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	SH3PXD2A	Q5TCZ1	1133 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	SPATA21	Q7Z572	469 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	CALN1	Q9BXU9	219 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	SYNC	Q9H7C4	482 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	CNOT10	Q9H9A5	744 aa	Known RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	METTL5	Q9NRN9	209 aa	Known RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	GPATCH2L	Q9NWQ4	482 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	NEU2	Q9Y3R4	380 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	USP15	Q9Y4E8	981 aa	Predicted RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	LY75	O60449	1722 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	RGS20	O76081	388 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	PAX7	P23759	505 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	ACTR2	P61160	394 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	NCALD	P61601	193 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	ANKRD22	Q5VYY1	191 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	C11orf63	Q6NUN7	778 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	SEC14L1	Q92503	715 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	MYCBP	Q99417	103 aa	Predicted RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	NCAPG	Q9BPX3	1015 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	GINM1	Q9NU53	330 aa		15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	MARCO	Q9UEW3	520 aa	Predicted RBP	15.69	■□□□□ 0.1
PRPF8-216	ENST00000577001	SLX4	Q8IY92	1834 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	MYPN	Q86TC9	1320 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001		A0A0G2JND7	137 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	TCRBV7S3A2	A0A539	114 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	FAM155B	O75949	473 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	VNN1	O95497	513 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	NUDT17	P0C025	328 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	EZR	P15311	586 aa	Known RBP	15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	WDR4	P57081	412 aa	Known RBP	15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	STRN3	Q13033	797 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	SLMAP	Q14BN4	828 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	SLC15A2	Q16348	729 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	ISLR2	Q6UXK2	745 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	NIM1K	Q8IY84	436 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	DDX27	Q96GQ7	796 aa	Known RBP	15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	STRA6	Q9BX79	667 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	MAGEB5	Q9BZ81	275 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	ZBED4	O75132	1171 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	ANP32D	O95626	131 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	CYP1A2	P05177	515 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	PDHA1	P08559	390 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	PTGER2	P43116	358 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	MMRN1	Q13201	1228 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	SLC1A5	Q15758	541 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	SEPT7	Q16181	437 aa	Known RBP	15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	BSPRY	Q5W0U4	402 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	SCYL2	Q6P3W7	929 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	TMEM192	Q8IY95	271 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	PGLYRP2	Q96PD5	576 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	MOV10L1	Q9BXT6	1211 aa	Known RBP	15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	ZNF395	Q9H8N7	513 aa	Predicted RBP	15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	GRID1	Q9ULK0	1009 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	UBIAD1	Q9Y5Z9	338 aa		15.68	■□□□□ 0.1
PRPF8-216	ENST00000577001	ONECUT3	O60422	494 aa	Predicted RBP	15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	GMPR	P36959	345 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	MAMLD1	Q13495	774 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	TFDP1	Q14186	410 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	CGB2	Q6NT52	195 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	UBA3	Q8TBC4	463 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	PGM2	Q96G03	612 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	PRR11	Q96HE9	360 aa	Predicted RBP	15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001		A6NNZ2	444 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	ITGBL1	O95965	494 aa	Predicted RBP	15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	PGK2	P07205	417 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	IVD	P26440	423 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	NUMB	P49757	651 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	TUBB8	Q3ZCM7	444 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	FOXR2	Q6PJQ5	311 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	ECHDC2	Q86YB7	292 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	TTLL6	Q8N841	843 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	EXOC7	Q9UPT5	735 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	LAMA2	P24043	3122 aa	Known RBP	15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	LGR5	O75473	907 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	SPDYE2	Q495Y8	402 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	GPAT2	Q6NUI2	795 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	FAM160B2	Q86V87	743 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	RHPN2	Q8IUC4	686 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	CTAGE3P	Q8IX95	158 aa		15.67	■□□□□ 0.1
PRPF8-216	ENST00000577001	ANKRD35	Q8N283	1001 aa		15.67	■□□□□ 0.1

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