RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZMYND10O75800 440 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 TNNC2P02585 160 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
SMG6-220ENST00000576218 SURF1Q15526 300 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 KNOP1Q1ED39 458 aaKnown RBP16.49■□□□□ 0.23
SMG6-220ENST00000576218 SV2CQ496J9 727 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 OTOP3Q7RTS5 596 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 EFCAB13Q8IY85 973 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 RDH13Q8NBN7 331 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 ZSWIM2Q8NEG5 633 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 FNBP1Q96RU3 617 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 C1QTNF1Q9BXJ1 281 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 PDE11AQ9HCR9 933 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
SMG6-220ENST00000576218 MUTYHQ9UIF7 546 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 HOOK1Q9UJC3 728 aaKnown RBP16.49■□□□□ 0.23
SMG6-220ENST00000576218 FBXL5Q9UKA1 691 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 CIZ1Q9ULV3 898 aaPredicted RBP16.49■□□□□ 0.23
SMG6-220ENST00000576218 VWA8A3KMH1 1905 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 FAM237AA0A1B0GTK4 181 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 M0QZQ0 153 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 CCL16O15467 120 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 EXOC3O60645 756 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 LRG1P02750 347 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 ITGB3P05106 788 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 HNRNPA1P09651 372 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMG6-220ENST00000576218 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
SMG6-220ENST00000576218 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
SMG6-220ENST00000576218 PNPLA4P41247 253 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 LILRA4P59901 499 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 ROR1Q01973 937 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 EHHADHQ08426 723 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 SNRNP35Q16560 246 aaKnown RBP16.48■□□□□ 0.23
SMG6-220ENST00000576218 OVOS1Q6IE37 1185 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 LILRA6Q6PI73 481 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 CBWD2Q8IUF1 395 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 XXYLT1Q8NBI6 393 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 SENP8Q96LD8 212 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 PRKD2Q9BZL6 878 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 DSEQ9UL01 958 aa16.48■□□□□ 0.23
SMG6-220ENST00000576218 CLUHO75153 1309 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 C2CD4DB7Z1M9 353 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 KLRC4O43908 158 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 DLATP10515 647 aaKnown RBP16.47■□□□□ 0.23
SMG6-220ENST00000576218 TNNI1P19237 187 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 BFSP1Q12934 665 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 STK4Q13043 487 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 BMT2Q1RMZ1 405 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 LMBRD2Q68DH5 695 aaPredicted RBP16.47■□□□□ 0.23
SMG6-220ENST00000576218 SLC8B1Q6J4K2 584 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 RSPO2Q6UXX9 243 aaPredicted RBP16.47■□□□□ 0.23
SMG6-220ENST00000576218 GET4Q7L5D6 327 aaPredicted RBP16.47■□□□□ 0.23
SMG6-220ENST00000576218 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 ZNF461Q8TAF7 563 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 OXCT2Q9BYC2 517 aaPredicted RBP16.47■□□□□ 0.23
SMG6-220ENST00000576218 MTMR12Q9C0I1 747 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 EPHX3Q9H6B9 360 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 CYP4F11Q9HBI6 524 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 ITGA11Q9UKX5 1188 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
SMG6-220ENST00000576218 WDR27A2RRH5 827 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 PIRO00625 290 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 CYB561D2O14569 222 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 TGFB1I1O43294 461 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 TYMPP19971 482 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 HOXD13P35453 343 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 RBP5P82980 135 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 UVSSAQ2YD98 709 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 TPGS2Q68CL5 300 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 THEM5Q8N1Q8 247 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 ELMOD1Q8N336 334 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 KIAA0895Q8NCT3 520 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 KHSRPQ92945 711 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMG6-220ENST00000576218 CCDC127Q96BQ5 260 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 WDR6Q9NNW5 1121 aaKnown RBP16.46■□□□□ 0.23
SMG6-220ENST00000576218 RMND1Q9NWS8 449 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
SMG6-220ENST00000576218 ANO9A1A5B4 782 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 OR6C75A6NL08 312 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 KPNA7A9QM74 516 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 PI4K2BG5E9Z4 385 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 CALUO43852 315 aaPredicted RBP16.45■□□□□ 0.22
SMG6-220ENST00000576218 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
SMG6-220ENST00000576218 SMC2O95347 1197 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 HOXA9P31269 272 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 AARSP49588 968 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMG6-220ENST00000576218 WNT7BP56706 349 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 ADCY1Q08828 1119 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 DPYDQ12882 1025 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 MYO1EQ12965 1108 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 DUOXA2Q1HG44 320 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 TMEM31Q5JXX7 168 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 GRASPQ7Z6J2 395 aaPredicted RBP16.45■□□□□ 0.22
SMG6-220ENST00000576218 C1orf127Q8N9H9 656 aa16.45■□□□□ 0.22
SMG6-220ENST00000576218 ZNF707Q96C28 371 aaPredicted RBP16.45■□□□□ 0.22
SMG6-220ENST00000576218 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms