RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 RNF19BQ6ZMZ0 732 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 HAUS6Q7Z4H7 955 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 ADAM33Q9BZ11 813 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 CCDC113Q9H0I3 377 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 TTC12Q9H892 705 aaPredicted RBP17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 COL4A2P08572 1712 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 FAM205CA6NFA0 338 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 HSPA4P34932 840 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 YARSP54577 528 aaKnown RBP17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 TNK2Q07912 1038 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 TOB2Q14106 344 aaPredicted RBP17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 CALCRLQ16602 461 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 ARHGAP29Q52LW3 1261 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 SH3PXD2AQ5TCZ1 1133 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 NT5DC1Q5TFE4 455 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 ATF7IP2Q5U623 682 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 LRSAM1Q6UWE0 723 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 KIFC3Q9BVG8 833 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 DMXL2Q8TDJ6 3036 aa17.85■□□□□ 0.45
CTDNEP1-211ENST00000575783 AKAP13Q12802 2813 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 CCDC163A0A0D9SF12 145 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 SOBPA7XYQ1 873 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 DTNBO60941 627 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 CREB5Q02930 508 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 RING1Q06587 406 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 PLK5Q496M5 336 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 DAB2IPQ5VWQ8 1189 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 ZNF280DQ6N043 979 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 CEP120Q8N960 986 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 ZC3H10Q96K80 434 aaKnown RBP17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 POLD4Q9HCU8 107 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 TOPORSQ9NS56 1045 aaPredicted RBP17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 SLC38A7Q9NVC3 462 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 POLR3BQ9NW08 1133 aaPredicted RBP17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 MAFFQ9ULX9 164 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 LHX6Q9UPM6 363 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 WASF3Q9UPY6 502 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 YIPF1Q9Y548 306 aa17.84■□□□□ 0.45
CTDNEP1-211ENST00000575783 TMEM8BA6NDV4 472 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 CDC45O75419 566 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 XBP1P17861 261 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 NAMPTP43490 491 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 APBB1IPQ7Z5R6 666 aaPredicted RBP17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 APPL2Q8NEU8 664 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 ZMAT2Q96NC0 199 aaKnown RBP17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 PGLYRP2Q96PD5 576 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 TMEM209Q96SK2 561 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 CCDC94Q9BW85 323 aaPredicted RBP17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 SCNM1Q9BWG6 230 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 TMEM121BQ9BXQ6 578 aaPredicted RBP17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 LRRC3Q9BY71 257 aa17.83■□□□□ 0.44
CTDNEP1-211ENST00000575783 PKD1L2Q7Z442 2459 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ARID2Q68CP9 1835 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 DCLK1O15075 740 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ATG13O75143 517 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 AKAP3O75969 853 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 CAVIN2O95810 425 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 SPATA31C1P0DKV0 1188 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 MARCKSP29966 332 aaPredicted RBP17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 MCM4P33991 863 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 EPHB3P54753 998 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ELF2Q15723 593 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ITPRIPL2Q3MIP1 535 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 PADI6Q6TGC4 694 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ALKAL1Q6UXT8 129 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 TMC8Q8IU68 726 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ZCCHC14Q8WYQ9 949 aaKnown RBP17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 DDX12PQ92771 950 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 C18orf25Q96B23 403 aaPredicted RBP17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ZNF274Q96GC6 653 aaPredicted RBP17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 SUSD3Q96L08 255 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 DUSP15Q9H1R2 295 aaPredicted RBP17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 ATXN3LQ9H3M9 355 aa17.82■□□□□ 0.44
CTDNEP1-211ENST00000575783 RHOBTB1O94844 696 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 OR4Q2P0C623 313 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 RPL9P32969 192 aaKnown RBP17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 GRM5P41594 1212 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 ALDH1A3P47895 512 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 EFNA5P52803 228 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 GRSF1Q12849 480 aaKnown RBP eCLIP17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 DUSP4Q13115 394 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 NR5A1Q13285 461 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 PPP2R5AQ15172 486 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 XKR4Q5GH76 650 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 GPR158Q5T848 1215 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 RUFY3Q7L099 469 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 CATSPER3Q86XQ3 398 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 GATA6Q92908 595 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 TBC1D32Q96NH3 1257 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 NACC1Q96RE7 527 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 DNAJC25Q9H1X3 360 aa17.81■□□□□ 0.44
CTDNEP1-211ENST00000575783 ARHGEF35A5YM69 484 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 K7ERI5 159 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 CYP11B2P19099 503 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 PLCB2Q00722 1185 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 CACNB1Q02641 598 aaPredicted RBP17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 PLD1Q13393 1074 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 CAMKK1Q8N5S9 505 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms