RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 NR1I2O75469 434 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 ZMYND10O75800 440 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 OAZ2O95190 189 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 SEC24AO95486 1093 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 RPN1P04843 607 aaKnown RBP9.4□□□□□ -0.9
SMG6-216ENST00000575176 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 BMP6P22004 513 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 KLRC2P26717 231 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 HOXA9P31269 272 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 CLDN10P78369 228 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 AMPD3Q01432 767 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 FAM160A1Q05DH4 1040 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 CYP24A1Q07973 514 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 PNOCQ13519 176 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 KCNB1Q14721 858 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 CCDC142Q17RM4 750 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 LMBRD2Q68DH5 695 aaPredicted RBP9.4□□□□□ -0.9
SMG6-216ENST00000575176 ARMCX5Q6P1M9 558 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 TMC5Q6UXY8 1006 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 EP400NLQ6ZTU2 488 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 PALB2Q86YC2 1186 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 SLC9A9Q8IVB4 645 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 ZC3H3Q8IXZ2 948 aaKnown RBP9.4□□□□□ -0.9
SMG6-216ENST00000575176 CEP57L1Q8IYX8 460 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 GJD3Q8N144 294 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 KREMEN2Q8NCW0 462 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 ZNF516Q92618 1163 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 TMEM209Q96SK2 561 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 EPHX3Q9H6B9 360 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 ZDHHC7Q9NXF8 308 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 EXOC7Q9UPT5 735 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 SSX2IPQ9Y2D8 614 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 TICRRQ7Z2Z1 1910 aa9.4□□□□□ -0.9
SMG6-216ENST00000575176 WDR87Q6ZQQ6 2873 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 NCANO14594 1321 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 CLUHO75153 1309 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 ARHGEF37A1IGU5 675 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 PI4K2BG5E9Z4 385 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 KIAA0391O15091 583 aaKnown RBP9.39□□□□□ -0.91
SMG6-216ENST00000575176 CLIC2O15247 247 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 HCRTO43612 131 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 IL18RAPO95256 599 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 TYMPP19971 482 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 MCM4P33991 863 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 OR1D2P34982 312 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 MATR3P43243 847 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMG6-216ENST00000575176 CASP4P49662 377 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 CREMQ03060 361 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 PSMD6Q15008 389 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 POSTNQ15063 836 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 SNRNP35Q16560 246 aaKnown RBP9.39□□□□□ -0.91
SMG6-216ENST00000575176 NFIL3Q16649 462 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 KNOP1Q1ED39 458 aaKnown RBP9.39□□□□□ -0.91
SMG6-216ENST00000575176 TPRNQ4KMQ1 711 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 COBLL1Q53SF7 1204 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 CLEC17AQ6ZS10 378 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 ANKS3Q6ZW76 656 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 OSTM1Q86WC4 334 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 NT5DC4Q86YG4 428 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 RNF135Q8IUD6 432 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 SMYD4Q8IYR2 804 aaPredicted RBP9.39□□□□□ -0.91
SMG6-216ENST00000575176 TTC9BQ8N6N2 239 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 ERCC4Q92889 916 aaPredicted RBP9.39□□□□□ -0.91
SMG6-216ENST00000575176 MFSD14AQ96MC6 490 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 XYLT2Q9H1B5 865 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 SMOC2Q9H3U7 446 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 PLEKHA4Q9H4M7 779 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 INTS13Q9NVM9 706 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 L1RE1Q9UN81 338 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 TRAF3IP3Q9Y228 551 aa9.39□□□□□ -0.91
SMG6-216ENST00000575176 TIMM13Q9Y5L4 95 aaPredicted RBP9.39□□□□□ -0.91
SMG6-216ENST00000575176 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.39□□□□□ -0.91
SMG6-216ENST00000575176 MOSPD3O75425 235 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 ITGB3P05106 788 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 C8AP07357 584 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 OR4Q2P0C623 313 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 SRGAP2BP0DMP2 458 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 POLR2BP30876 1174 aaKnown RBP9.38□□□□□ -0.91
SMG6-216ENST00000575176 CA8P35219 290 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 SNRPFP62306 86 aaKnown RBP9.38□□□□□ -0.91
SMG6-216ENST00000575176 SLC5A9Q2M3M2 681 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 PRSS36Q5K4E3 855 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 PDXDC1Q6P996 788 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 TCEAL8Q8IYN2 117 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 GUF1Q8N442 669 aaKnown RBP9.38□□□□□ -0.91
SMG6-216ENST00000575176 ZNF461Q8TAF7 563 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 SLC7A14Q8TBB6 771 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 KBTBD7Q8WVZ9 684 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 MYADMQ96S97 322 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 LRRC3Q9BY71 257 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 PRKD2Q9BZL6 878 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 DNAJC25Q9H1X3 360 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms