RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TBXAS1P24557 533 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 SOX5P35711 763 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 STAT1P42224 750 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 EPHB4P54760 987 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 WDR5P61964 334 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 DEFB103AP81534 67 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 CCZ1BP86790 482 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 CCZ1P86791 482 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 TUSC3Q13454 348 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 TMEM139Q8IV31 216 aa25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 BAG1Q99933 345 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 RNF216Q9NWF9 866 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-213ENST00000574428 PODXLO00592 558 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 HOXA2O43364 376 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 B4GALT3O60512 393 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 GFPT2O94808 682 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 IGFBP6P24592 240 aaPredicted RBP25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 USP8P40818 1118 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 RNASELQ05823 741 aaKnown RBP25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 ASIC2Q16515 512 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 TMCO2Q7Z6W1 182 aaPredicted RBP25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 ZNF280BQ86YH2 543 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 TNS4Q8IZW8 715 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 SHC3Q92529 594 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 SYN2Q92777 582 aaPredicted RBP25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 FAM81BQ96LP2 452 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 ZNF560Q96MR9 790 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 SMYD3Q9H7B4 428 aa25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 ZNHIT6Q9NWK9 470 aaKnown RBP25.78■■□□□ 1.72
ATPAF1-213ENST00000574428 SPTLC1O15269 473 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 BAIAP3O94812 1187 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 DDHD2O94830 711 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 AMHP03971 560 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 HNRNPH3P31942 346 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 RAP1GAPP47736 663 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 TNNC1P63316 161 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 MEA1Q16626 185 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 ZNF365Q70YC5 407 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 AIPL1Q9NZN9 384 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 KANSL3Q9P2N6 904 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 TBKBP1A7MCY6 615 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 EFCAB14O75071 495 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 WEE2P0C1S8 567 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 SKILP12757 684 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 PNPLA4P41247 253 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 TAF6P49848 677 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 UPP1Q16831 310 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 CHP1Q99653 195 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 SNX9Q9Y5X1 595 aa25.77■■□□□ 1.72
ATPAF1-213ENST00000574428 KRT5P13647 590 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 P4HA1P13674 534 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 CD58P19256 250 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 ACO1P21399 889 aaKnown RBP25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 FECHP22830 423 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 RPL9P32969 192 aaKnown RBP25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 FAM117BQ6P1L5 589 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 C3orf58Q8NDZ4 430 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 CCDC112Q8NEF3 446 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 MMS19Q96T76 1030 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 BCO2Q9BYV7 579 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 SDCBP2Q9H190 292 aa25.76■■□□□ 1.71
ATPAF1-213ENST00000574428 ZNF500O60304 480 aaPredicted RBP25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 FGBP02675 491 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 CDH8P55286 799 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 LILRA4P59901 499 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 DSC1Q08554 894 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 SV2CQ496J9 727 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 PAN2Q504Q3 1202 aaKnown RBP25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 IRF2BP2Q7Z5L9 587 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 FAM71AQ8IYT1 594 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 TOP1MTQ969P6 601 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 JAKMIP2Q96AA8 810 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 HCSTQ9UBK5 93 aa25.75■■□□□ 1.71
ATPAF1-213ENST00000574428 ZBBXA8MT70 800 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 KPNA7A9QM74 516 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 PLEKP08567 350 aaPredicted RBP25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 KCNJ6P48051 423 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 HGSNATQ68CP4 663 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 COLGALT2Q8IYK4 626 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 UBR7Q8N806 425 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 UROC1Q96N76 676 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 CISHQ9NSE2 258 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 DNAJB4Q9UDY4 337 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 PCDHB4Q9Y5E5 795 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 SOWAHDA6NJG2 315 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 FERP16591 822 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 TMEM240Q5SV17 173 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 CYP26C1Q6V0L0 522 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 DDX27Q96GQ7 796 aaKnown RBP25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 FAM193BQ96PV7 902 aaPredicted RBP25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 ARHGAP20Q9P2F6 1191 aa25.74■■□□□ 1.71
ATPAF1-213ENST00000574428 FNDC1Q4ZHG4 1894 aaPredicted RBP25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 COL4A6Q14031 1691 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 F8W810 466 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 CYP26A1O43174 497 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 DGKIO75912 1065 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 KLHL30Q0D2K2 578 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 PSRC1Q6PGN9 363 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms