RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 SPATA1Q5VX52 437 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 ZNF280DQ6N043 979 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 DSTYKQ6XUX3 929 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 NPAS3Q8IXF0 933 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 GPR152Q8TDT2 470 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 NOC3LQ8WTT2 800 aaKnown RBP12.29□□□□□ -0.44
RPAIN-214ENST00000574003 TCEAL4Q96EI5 215 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 MCRS1Q96EZ8 462 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-214ENST00000574003 KXD1Q9BQD3 176 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 FAM213AQ9BRX8 229 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 CRISPLD1Q9H336 500 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 ST6GALNAC4Q9H4F1 302 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 PCIF1Q9H4Z3 704 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPAIN-214ENST00000574003 CDH7Q9ULB5 785 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 INSL5Q9Y5Q6 135 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 STYXL1Q9Y6J8 313 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-214ENST00000574003 FRMD3A2A2Y4 597 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 SOAT2O75908 522 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 LRG1P02750 347 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 CPB1P15086 417 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 ATF2P15336 505 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 GJA1P17302 382 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 GAP43P17677 238 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 CYP3A5P20815 502 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-214ENST00000574003 ELF1P32519 619 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 CCR2P41597 374 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 LILRA4P59901 499 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 YWHAHQ04917 246 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-214ENST00000574003 UVSSAQ2YD98 709 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 L1TD1Q5T7N2 865 aaKnown RBP12.28□□□□□ -0.44
RPAIN-214ENST00000574003 TTC9BQ8N6N2 239 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 APPL2Q8NEU8 664 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 BEST2Q8NFU1 509 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 SENP8Q96LD8 212 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 ACCSQ96QU6 501 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 CORO1BQ9BR76 489 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 CBWD1Q9BRT8 395 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 PLA2G2FQ9BZM2 168 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 CEP72Q9P209 647 aa12.28□□□□□ -0.44
RPAIN-214ENST00000574003 MRPS23Q9Y3D9 190 aaKnown RBP12.28□□□□□ -0.44
RPAIN-214ENST00000574003 ARHGEF37A1IGU5 675 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 H0Y858 1186 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 PIRO00625 290 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 PPP6R2O75170 966 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 OAZ2O95190 189 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 GPC5P78333 572 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 DNM1Q05193 864 aaKnown RBP12.27□□□□□ -0.45
RPAIN-214ENST00000574003 TWF1Q12792 350 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 KYAT1Q16773 422 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 LMBRD2Q68DH5 695 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-214ENST00000574003 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-214ENST00000574003 SLFN12LQ6IEE8 588 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 USP37Q86T82 979 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 TCEAL8Q8IYN2 117 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 SYCP3Q8IZU3 236 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 ATAD1Q8NBU5 361 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 OR10T2Q8NGX3 314 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 BLZF1Q9H2G9 400 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 DPP3Q9NY33 737 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 SEL1LQ9UBV2 794 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 AFF4Q9UHB7 1163 aaKnown RBP12.27□□□□□ -0.45
RPAIN-214ENST00000574003 PCDHA7Q9UN72 937 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 SLC27A5Q9Y2P5 690 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 TSC2P49815 1807 aa12.27□□□□□ -0.45
RPAIN-214ENST00000574003 ANO9A1A5B4 782 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 STK25O00506 426 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 XPOTO43592 962 aaKnown RBP12.26□□□□□ -0.45
RPAIN-214ENST00000574003 CUTAO60888 179 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 MOSPD3O75425 235 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 YEATS4O95619 227 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 POU2F2P09086 479 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 SRFP11831 508 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 MYL4P12829 197 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 SCP2P22307 547 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 HOXD13P35453 343 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 MRE11P49959 708 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 DUSP4Q13115 394 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 PRSS36Q5K4E3 855 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 OVOS1Q6IE37 1185 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 CD302Q8IX05 232 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 GRAMD1CQ8IYS0 662 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 HVCN1Q96D96 273 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 RTP3Q9BQQ7 232 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 PYM1Q9BRP8 204 aaKnown RBP12.26□□□□□ -0.45
RPAIN-214ENST00000574003 KCNH6Q9H252 994 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 OLFML3Q9NRN5 406 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 KBTBD4Q9NVX7 518 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 EXOC7Q9UPT5 735 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 YIPF1Q9Y548 306 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 TCHHQ07283 1943 aa12.26□□□□□ -0.45
RPAIN-214ENST00000574003 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
RPAIN-214ENST00000574003 GALR2O43603 387 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-214ENST00000574003 LRRN2O75325 713 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms