RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ALCAMQ13740 583 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 C9orf57Q5W0N0 161 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 OVOS1Q6IE37 1185 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 SHC4Q6S5L8 630 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 TCEAL8Q8IYN2 117 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 SIX5Q8N196 739 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 IQUBQ8NA54 791 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 PRSS33Q8NF86 280 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 KCNG4Q8TDN1 519 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 NXPE3Q969Y0 559 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 PGLYRP2Q96PD5 576 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 PRRX2Q99811 253 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 CORO1BQ9BR76 489 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 FGFBP2Q9BYJ0 223 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 CUEDC2Q9H467 287 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 PCIF1Q9H4Z3 704 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 MRPS23Q9Y3D9 190 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 INSL5Q9Y5Q6 135 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 ARHGEF37A1IGU5 675 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 FRMD3A2A2Y4 597 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 GOLGA8IPA6NC78 632 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 GOLGA8JA6NMD2 632 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 IL18RAPO95256 599 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 RHOP08100 348 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 PTPN2P17706 415 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 LILRA4P59901 499 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 ASIC1P78348 528 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 NHLH1Q02575 133 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 HTR4Q13639 388 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 E2F4Q16254 413 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 PARM1Q6UWI2 310 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 CRELD2Q6UXH1 353 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 STXBP4Q6ZWJ1 553 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 ELMOD1Q8N336 334 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 HPS3Q969F9 1004 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 SENP8Q96LD8 212 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 TMEM206Q9H813 350 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 FAM13BQ9NYF5 915 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 AFF4Q9UHB7 1163 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 CFAP45Q9UL16 551 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 CA14Q9ULX7 337 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
NPLOC4-213ENST00000573519 ANHXE9PGG2 379 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 PIRO00625 290 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 SPTLC1O15269 473 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 OAZ2O95190 189 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 LDHAP00338 332 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 SRFP11831 508 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 AARSP49588 968 aaKnown RBP eCLIP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 PTPN5P54829 565 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 TWF1Q12792 350 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 SLC5A9Q2M3M2 681 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 ASTLQ6HA08 431 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 IQCEQ6IPM2 695 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 ARMCX5Q6P1M9 558 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 MTSS1LQ765P7 747 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 EFCAB13Q8IY85 973 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 TMEM105Q8N8V8 129 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 ZSWIM2Q8NEG5 633 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 GPR152Q8TDT2 470 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 FGF14Q92915 247 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 ZNF512Q96ME7 567 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 PYM1Q9BRP8 204 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 CBWD1Q9BRT8 395 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 OXCT2Q9BYC2 517 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 RBAKQ9NYW8 714 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 KCNH3Q9ULD8 1083 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 KMT2EQ8IZD2 1858 aa13.74□□□□□ -0.21
NPLOC4-213ENST00000573519 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 OR6C75A6NL08 312 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 CYB561D2O14569 222 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 CEBPBP17676 345 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 TYMPP19971 482 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 GARTP22102 1010 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 TAF6P49848 677 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 BECN1Q14457 450 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 CYP4A22Q5TCH4 519 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 ATL3Q6DD88 541 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 PDZD4Q76G19 769 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 METTL23Q86XA0 190 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 BRSK2Q8IWQ3 736 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 NPAS3Q8IXF0 933 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 RPP25Q9BUL9 199 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 WNT16Q9UBV4 365 aa13.73□□□□□ -0.21
NPLOC4-213ENST00000573519 RCOR1Q9UKL0 485 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms