RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 PSMA7O14818 248 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 TCEA1P23193 301 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 PPP1R2P41236 205 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 DNM2P50570 870 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 DYNLL1P63167 89 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 KRT76Q01546 638 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 GIT2Q14161 759 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 MEA1Q16626 185 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 KLHDC10Q6PID8 442 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 CYP2U1Q7Z449 544 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 MMAAQ8IVH4 418 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 NATD1Q8N6N6 113 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 TTC8Q8TAM2 541 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 ZNF507Q8TCN5 953 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 MAML1Q92585 1016 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 SPZ1Q9BXG8 430 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 CUEDC2Q9H467 287 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 EHMT1Q9H9B1 1298 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 REXO2Q9Y3B8 237 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 CYP2D7A0A087X1C5 515 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 MACROD2A1Z1Q3 448 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 SOBPA7XYQ1 873 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 USP17L21D6R901 530 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 RNF225M0QZC1 329 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CDC25AP30304 524 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CRKLP46109 303 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GYG1P46976 350 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 STAT2P52630 851 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 DSG1Q02413 1049 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CDK18Q07002 472 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 PDE4DQ08499 809 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GALNT1Q10472 559 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 Q3C1V9 767 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 RNF43Q68DV7 783 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 NEK5Q6P3R8 708 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 PPP1R21Q6ZMI0 780 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 KRT77Q7Z794 578 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GALNT7Q86SF2 657 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 IRF2BP1Q8IU81 584 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 DAGLBQ8NCG7 672 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 NRG4Q8WWG1 115 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 SCYL1Q96KG9 808 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GPATCH1Q9BRR8 931 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CDCA7Q9BWT1 371 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 EPB41L5Q9HCM4 733 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 POLMQ9NP87 494 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 NIP7Q9Y221 180 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 IFT52Q9Y366 437 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 UTP11Q9Y3A2 253 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 PCDHGA11Q9Y5H2 935 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 IQANK1A0A1B0GTG1 560 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 TTC26A0AVF1 554 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 RHOBTB3O94955 611 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 ALAS1P13196 640 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 PRKACAP17612 351 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CYLC1P35663 651 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 SLC1A1P43005 524 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 POLD2P49005 469 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CENPAP49450 140 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 HNRNPFP52597 415 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GNA13Q14344 377 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 STK11Q15831 433 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 TMEM266Q2M3C6 531 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 FAM182BQ5T319 152 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 TMEM63BQ5T3F8 832 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 SLC30A10Q6XR72 485 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 RBM44Q6ZP01 1051 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CYP4V2Q6ZWL3 525 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 MIER3Q7Z3K6 550 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 FITM2Q8N6M3 262 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GIMAP8Q8ND71 665 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 RMDN1Q96DB5 314 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GJD4Q96KN9 370 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CHP1Q99653 195 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 VPS33BQ9H267 617 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 DENND2DQ9H6A0 471 aaPredicted RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 CYLDQ9NQC7 956 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 TRNAU1APQ9NX07 287 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 TBK1Q9UHD2 729 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 GDAQ9Y2T3 454 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
CHRNB1-205ENST00000573209 SMIM22K7EJ46 135 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 MCF2LO15068 1137 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 TRMUO75648 421 aaKnown RBP11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 SRGNP10124 158 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 CFL1P23528 166 aaKnown RBP11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 RPL5P46777 297 aaKnown RBP11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 EIF3BP55884 814 aaKnown RBP11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 HERVK_113P62684 666 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 DNAJC3Q13217 504 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 LAPTM5Q13571 262 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 SF3B3Q15393 1217 aaKnown RBP11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 RELL1Q8IUW5 271 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 KIAA1958Q8N8K9 716 aa11.07□□□□□ -0.64
CHRNB1-205ENST00000573209 TBC1D16Q8TBP0 767 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms