RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 STK25O00506 426 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 PRRG1O14668 218 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 PTPN2P17706 415 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 FCARP24071 287 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 WNT7BP56706 349 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 STARD6P59095 220 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 ANGPT1Q15389 498 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 CRELD2Q6UXH1 353 aaPredicted RBP19.69■□□□□ 0.74
CHD3-214ENST00000572579 DYMQ7RTS9 669 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 SFR1Q86XK3 245 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 APPL2Q8NEU8 664 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 USP28Q96RU2 1077 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 TMEM209Q96SK2 561 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 MSTO1Q9BUK6 570 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 DDX23Q9BUQ8 820 aaKnown RBP19.69■□□□□ 0.74
CHD3-214ENST00000572579 FGFBP2Q9BYJ0 223 aa19.69■□□□□ 0.74
CHD3-214ENST00000572579 AFF4Q9UHB7 1163 aaKnown RBP19.69■□□□□ 0.74
CHD3-214ENST00000572579 PIRO00625 290 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 KRT18P05783 430 aaKnown RBP19.68■□□□□ 0.74
CHD3-214ENST00000572579 ELF1P32519 619 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 LILRA4P59901 499 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 PPP2R3AQ06190 1150 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 SLC44A4Q53GD3 710 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 C9orf57Q5W0N0 161 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 ZNF280DQ6N043 979 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 MTSS1LQ765P7 747 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 FAM212AQ96EL1 285 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 LRRC3Q9BY71 257 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 PANK2Q9BZ23 570 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 DNAJC25Q9H1X3 360 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 GDE1Q9NZC3 331 aa19.68■□□□□ 0.74
CHD3-214ENST00000572579 ANO9A1A5B4 782 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 TBCAO75347 108 aaKnown RBP19.67■□□□□ 0.74
CHD3-214ENST00000572579 LRG1P02750 347 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 GJA1P17302 382 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 PDCP20941 246 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 CASP5P51878 434 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 YWHAHQ04917 246 aaPredicted RBP19.67■□□□□ 0.74
CHD3-214ENST00000572579 TWF1Q12792 350 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 FAM78AQ5JUQ0 283 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 MAML2Q8IZL2 1156 aaPredicted RBP19.67■□□□□ 0.74
CHD3-214ENST00000572579 TTC9BQ8N6N2 239 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 RASSF8Q8NHQ8 419 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 INTS4Q96HW7 963 aaKnown RBP19.67■□□□□ 0.74
CHD3-214ENST00000572579 PGLYRP2Q96PD5 576 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 TBC1D7Q9P0N9 293 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 SIT1Q9Y3P8 196 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 NCANO14594 1321 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 WDR87Q6ZQQ6 2873 aa19.67■□□□□ 0.74
CHD3-214ENST00000572579 PRR23AA6NEV1 266 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 ECI2O75521 394 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 CD72P21854 359 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 SCP2P22307 547 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 CDR1P51861 262 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 EPHA5P54756 1037 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 SLC39A14Q15043 492 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 KYAT1Q16773 422 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 ADALQ6DHV7 355 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 KRI1Q8N9T8 703 aaKnown RBP19.66■□□□□ 0.74
CHD3-214ENST00000572579 BORCS6Q96GS4 357 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 SENP8Q96LD8 212 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 SLC27A5Q9Y2P5 690 aa19.66■□□□□ 0.74
CHD3-214ENST00000572579 CITO14578 2027 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 MICAL2O94851 1124 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 TYMPP19971 482 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 DUSP4Q13115 394 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 RRAGBQ5VZM2 374 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 DSTYKQ6XUX3 929 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 EFCAB13Q8IY85 973 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 ATAD1Q8NBU5 361 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 PJA1Q8NG27 643 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 OR10T2Q8NGX3 314 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 FAM84AQ96KN4 292 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 TSPAN18Q96SJ8 248 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 STK17AQ9UEE5 414 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 AGO2Q9UKV8 859 aaKnown RBP19.65■□□□□ 0.74
CHD3-214ENST00000572579 MAFFQ9ULX9 164 aa19.65■□□□□ 0.74
CHD3-214ENST00000572579 MORC2Q9Y6X9 1032 aaPredicted RBP19.65■□□□□ 0.74
CHD3-214ENST00000572579 SOAT2O75908 522 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 CPB1P15086 417 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 GPR17Q13304 367 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 FZD5Q13467 585 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 MLF2Q15773 248 aaPredicted RBP19.64■□□□□ 0.73
CHD3-214ENST00000572579 CENPPQ6IPU0 288 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 TMC8Q8IU68 726 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 CD302Q8IX05 232 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 RSPRY1Q96DX4 576 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 ASB16Q96NS5 453 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 YIPF1Q9Y548 306 aa19.64■□□□□ 0.73
CHD3-214ENST00000572579 MYH11P35749 1972 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 KANSL1LA0AUZ9 987 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 FRMD3A2A2Y4 597 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 VIPR2P41587 438 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 GRM2Q14416 872 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 TMEM132DQ14C87 1099 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 OVOS1Q6IE37 1185 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 PDZD4Q76G19 769 aaPredicted RBP19.63■□□□□ 0.73
CHD3-214ENST00000572579 SV2BQ7L1I2 683 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 LRRTM3Q86VH5 581 aa19.63■□□□□ 0.73
CHD3-214ENST00000572579 ZNF687Q8N1G0 1237 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms