RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CITO14578 2027 aa21.72■■□□□ 1.07
CCDC40-206ENST00000572083 A0A1W2PRU2 124 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 RPL9P32969 192 aaKnown RBP21.71■■□□□ 1.07
CCDC40-206ENST00000572083 CCT6AP40227 531 aaKnown RBP21.71■■□□□ 1.07
CCDC40-206ENST00000572083 NPTX2P47972 431 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 GUCY1B3Q02153 619 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 ANKRD1Q15327 319 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 ZNF174Q15697 407 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 STXBP5Q5T5C0 1151 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 HAUS3Q68CZ6 603 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 TXNDC11Q6PKC3 985 aa21.71■■□□□ 1.07
CCDC40-206ENST00000572083 FAM160A2Q8N612 972 aaPredicted RBP21.71■■□□□ 1.07
CCDC40-206ENST00000572083 DAXXQ9UER7 740 aaPredicted RBP21.71■■□□□ 1.07
CCDC40-206ENST00000572083 CNR2P34972 360 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 CEP68Q76N32 757 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 TMC8Q8IU68 726 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 APPL2Q8NEU8 664 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 MSANTD3Q96H12 275 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 PGLYRP2Q96PD5 576 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 TCHPQ9BT92 498 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 TUBGCP4Q9UGJ1 667 aa21.7■■□□□ 1.06
CCDC40-206ENST00000572083 FRYQ5TBA9 3013 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 SPECC1L-ADORA2AF8WAN1 911 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 ABLIM1O14639 778 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 CHADO15335 359 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 PAPSS2O95340 614 aaPredicted RBP21.69■■□□□ 1.06
CCDC40-206ENST00000572083 VNN2O95498 520 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 OR4Q2P0C623 313 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 MCF2P10911 925 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 MLLT6P55198 1093 aaPredicted RBP21.69■■□□□ 1.06
CCDC40-206ENST00000572083 FCHO2Q0JRZ9 810 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 SEZ6Q53EL9 994 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 DAW1Q8N136 415 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 E2F7Q96AV8 911 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 ZFYVE19Q96K21 471 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 C8orf33Q9H7E9 229 aaPredicted RBP21.69■■□□□ 1.06
CCDC40-206ENST00000572083 MAFFQ9ULX9 164 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 PCDHB8Q9UN66 801 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 KIAA1024Q9UPX6 916 aa21.69■■□□□ 1.06
CCDC40-206ENST00000572083 TIMM13Q9Y5L4 95 aaPredicted RBP21.69■■□□□ 1.06
CCDC40-206ENST00000572083 MUTP22033 750 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 PROZP22891 400 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 DMP1Q13316 513 aaPredicted RBP21.68■■□□□ 1.06
CCDC40-206ENST00000572083 CCDC6Q16204 474 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 AASDHQ4L235 1098 aaPredicted RBP21.68■■□□□ 1.06
CCDC40-206ENST00000572083 IL31Q6EBC2 164 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 C1orf228Q6PIY5 440 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 MPZL3Q6UWV2 235 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 FAM200AQ8TCP9 573 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 ZBTB45Q96K62 511 aaPredicted RBP21.68■■□□□ 1.06
CCDC40-206ENST00000572083 LRRC3Q9BY71 257 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 GPR88Q9GZN0 384 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 DNAJC25Q9H1X3 360 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 CRISPLD1Q9H336 500 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 TMEM134Q9H6X4 195 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 DDX19AQ9NUU7 478 aaKnown RBP21.68■■□□□ 1.06
CCDC40-206ENST00000572083 GTSE1Q9NYZ3 720 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 ARHGAP28Q9P2N2 729 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 ANKFY1Q9P2R3 1169 aa21.68■■□□□ 1.06
CCDC40-206ENST00000572083 MYBPHLA2RUH7 354 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 HIP1RO75146 1068 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 MARCKSP29966 332 aaPredicted RBP21.67■■□□□ 1.06
CCDC40-206ENST00000572083 CTHP32929 405 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 YWHAHQ04917 246 aaPredicted RBP21.67■■□□□ 1.06
CCDC40-206ENST00000572083 PON2Q15165 354 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 SF3A2Q15428 464 aaKnown RBP21.67■■□□□ 1.06
CCDC40-206ENST00000572083 ARID3BQ8IVW6 561 aaPredicted RBP21.67■■□□□ 1.06
CCDC40-206ENST00000572083 BEST2Q8NFU1 509 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 LRRC3BQ96PB8 259 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 KMT5AQ9NQR1 393 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 ANGPTL2Q9UKU9 493 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 LAMA1P25391 3075 aa21.67■■□□□ 1.06
CCDC40-206ENST00000572083 ASPMQ8IZT6 3477 aa21.66■■□□□ 1.06
CCDC40-206ENST00000572083 DUSP4Q13115 394 aa21.66■■□□□ 1.06
CCDC40-206ENST00000572083 SAFBQ15424 915 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCDC40-206ENST00000572083 DGKKQ5KSL6 1271 aa21.66■■□□□ 1.06
CCDC40-206ENST00000572083 DDX1Q92499 740 aaKnown RBP21.66■■□□□ 1.06
CCDC40-206ENST00000572083 ARRDC1-AS1Q9H2J1 176 aa21.66■■□□□ 1.06
CCDC40-206ENST00000572083 LRWD1Q9UFC0 647 aa21.66■■□□□ 1.06
CCDC40-206ENST00000572083 GREB1Q4ZG55 1949 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 NUP210Q8TEM1 1887 aaPredicted RBP21.65■■□□□ 1.06
CCDC40-206ENST00000572083 CNOT1A5YKK6 2376 aaKnown RBP21.65■■□□□ 1.06
CCDC40-206ENST00000572083 E9PMD0 336 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 AXIN1O15169 862 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 FOXD2O60548 495 aaPredicted RBP21.65■■□□□ 1.06
CCDC40-206ENST00000572083 EPHB3P54753 998 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 SPAG1Q07617 926 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 PLD1Q13393 1074 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 ORC2Q13416 577 aaPredicted RBP21.65■■□□□ 1.06
CCDC40-206ENST00000572083 CCINQ13939 588 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 SLC10A6Q3KNW5 377 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 TTC38Q5R3I4 469 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 WDR5BQ86VZ2 330 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 RALGPS2Q86X27 583 aaPredicted RBP21.65■■□□□ 1.06
CCDC40-206ENST00000572083 SNX29Q8TEQ0 813 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 MKNK1Q9BUB5 465 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 RXFP3Q9NSD7 469 aa21.65■■□□□ 1.06
CCDC40-206ENST00000572083 M0QZQ0 153 aa21.64■■□□□ 1.05
CCDC40-206ENST00000572083 DPYSL4O14531 572 aa21.64■■□□□ 1.05
CCDC40-206ENST00000572083 SLC16A4O15374 487 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms