RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 ITFG1Q8TB96 612 aa32.88■■■□□ 2.85
CTDNEP1-206ENST00000571409 OAZ2O95190 189 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 ADCY1Q08828 1119 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 HTR4Q13639 388 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 ATL3Q6DD88 541 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 IQUBQ8NA54 791 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 ST13P5Q8NFI4 369 aaPredicted RBP32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 FGF13Q92913 245 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 FAM213AQ9BRX8 229 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 TRIM9Q9C026 710 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 MFSD1Q9H3U5 465 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 AFF4Q9UHB7 1163 aaKnown RBP32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 FBXL21Q9UKT6 434 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 INSL5Q9Y5Q6 135 aa32.87■■■□□ 2.85
CTDNEP1-206ENST00000571409 NOTCH4Q99466 2003 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 ANO9A1A5B4 782 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 ANHXE9PGG2 379 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 PIRO00625 290 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 PRPF6O94906 941 aaKnown RBP32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 ME1P48163 572 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 AMPD3Q01432 767 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 PRSS33Q8NF86 280 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 SAAL1Q96ER3 474 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 OXCT2Q9BYC2 517 aaPredicted RBP32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 PCDHA7Q9UN72 937 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 NUMBLQ9Y6R0 609 aa32.86■■■□□ 2.85
CTDNEP1-206ENST00000571409 SPTLC1O15269 473 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 IL18RAPO95256 599 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 GARTP22102 1010 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 PAX3P23760 479 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 DNM1Q05193 864 aaKnown RBP32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 RNF19BQ6ZMZ0 732 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 EFCAB13Q8IY85 973 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 ZSWIM2Q8NEG5 633 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 SENP8Q96LD8 212 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 PRRX2Q99811 253 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 TMEM206Q9H813 350 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 DPP3Q9NY33 737 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 CFAP45Q9UL16 551 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 KCNH3Q9ULD8 1083 aa32.85■■■□□ 2.85
CTDNEP1-206ENST00000571409 RHOP08100 348 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 CFHP08603 1231 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 ODC1P11926 461 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 PTPN2P17706 415 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 TYMPP19971 482 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 ASIC1P78348 528 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 OVOS1Q6IE37 1185 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 HPS3Q969F9 1004 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 MAFFQ9ULX9 164 aa32.84■■■□□ 2.85
CTDNEP1-206ENST00000571409 TULP1O00294 542 aaPredicted RBP32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 POLR2DO15514 142 aaKnown RBP32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 LDHAP00338 332 aaKnown RBP32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 OR4Q2P0C623 313 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 SRFP11831 508 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 NHLH1Q02575 133 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 PARM1Q6UWI2 310 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 STXBP4Q6ZWJ1 553 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 GLIS3Q8NEA6 775 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 ING5Q8WYH8 240 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 FGF14Q92915 247 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 CBWD1Q9BRT8 395 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 MRPS23Q9Y3D9 190 aaKnown RBP32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 TSC2P49815 1807 aa32.83■■■□□ 2.85
CTDNEP1-206ENST00000571409 WDFY4Q6ZS81 3184 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 OR6C75A6NL08 312 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 WNT7BP56706 349 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 SLC5A9Q2M3M2 681 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 NT5DC4Q86YG4 428 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 BRSK2Q8IWQ3 736 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 NPAS3Q8IXF0 933 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 CORO1BQ9BR76 489 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 PCIF1Q9H4Z3 704 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 MAGEF1Q9HAY2 307 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 FAM13BQ9NYF5 915 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 MUC6Q6W4X9 2439 aa32.82■■■□□ 2.84
CTDNEP1-206ENST00000571409 ZDBF2Q9HCK1 2354 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 GOLGA8IPA6NC78 632 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 GOLGA8JA6NMD2 632 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 SCN1AP35498 2009 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 RESP18Q5W5W9 173 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 ASTLQ6HA08 431 aaPredicted RBP32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 MTSS1LQ765P7 747 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 SIX5Q8N196 739 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 FLCNQ8NFG4 579 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 NOC3LQ8WTT2 800 aaKnown RBP32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 C7orf25Q9BPX7 421 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 AVENQ9NQS1 362 aaPredicted RBP32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 RBAKQ9NYW8 714 aaPredicted RBP32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 WNT16Q9UBV4 365 aa32.81■■■□□ 2.84
CTDNEP1-206ENST00000571409 TAF6P49848 677 aa32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 TWF1Q12792 350 aa32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 ARMCX5Q6P1M9 558 aa32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 CNNM4Q6P4Q7 775 aa32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 ELMOD1Q8N336 334 aa32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 TMEM105Q8N8V8 129 aa32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 PGLYRP2Q96PD5 576 aa32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 RPP25Q9BUL9 199 aaKnown RBP32.8■■■□□ 2.84
CTDNEP1-206ENST00000571409 EXTL3O43909 919 aa32.79■■■□□ 2.84
CTDNEP1-206ENST00000571409 PTPN5P54829 565 aa32.79■■■□□ 2.84
CTDNEP1-206ENST00000571409 TFAMQ00059 246 aaKnown RBP32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms