RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HTR4Q13639 388 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 STK38Q15208 465 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZC2HC1CQ53FD0 456 aaPredicted RBP13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 ADALQ6DHV7 355 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 SLFN12LQ6IEE8 588 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 SLC39A4Q6P5W5 647 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 SIX5Q8N196 739 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 SLC44A3Q8N4M1 653 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 FLCNQ8NFG4 579 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 FGF13Q92913 245 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 SNX21Q969T3 373 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 TSPAN18Q96SJ8 248 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 MRPL44Q9H9J2 332 aaKnown RBP13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 NUMBLQ9Y6R0 609 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 MYMKA6NI61 221 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 ANHXE9PGG2 379 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 TBC1D4O60343 1298 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 ABLIM3O94929 683 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 CFHP08603 1231 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 SRFP11831 508 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 CPB1P15086 417 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 ATF2P15336 505 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 NASPP49321 788 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 CLCN5P51795 746 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 YWHAHQ04917 246 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 MRPL58Q14197 206 aaKnown RBP13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZBTB6Q15916 424 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 TPGS2Q68CL5 300 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 JADE1Q6IE81 842 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 DSTYKQ6XUX3 929 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 MTSS1LQ765P7 747 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZNF720Q7Z2F6 126 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 USP37Q86T82 979 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 TMEM105Q8N8V8 129 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZNF396Q96N95 335 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 ADAM33Q9BZ11 813 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 CYP4F11Q9HBI6 524 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 HCFC1R1Q9NWW0 138 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 CPSF3Q9UKF6 684 aaKnown RBP13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 KCNH3Q9ULD8 1083 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 EXOC7Q9UPT5 735 aa13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 MRPS23Q9Y3D9 190 aaKnown RBP13.42□□□□□ -0.26
CTDNEP1-205ENST00000570828 VWA8A3KMH1 1905 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 CACNA1HO95180 2353 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 TISP43B9A030 160 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 ANKRD63C9JTQ0 380 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 M0QZQ0 153 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 GCNT3O95395 438 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 ADRB2P07550 413 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 NFICP08651 508 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 IDEP14735 1019 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 AARSP49588 968 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 ACOT2P49753 483 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 TCF15Q12870 199 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 ALYREFQ86V81 257 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 TCEAL8Q8IYN2 117 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 ELMOD1Q8N336 334 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 TMEM130Q8N3G9 435 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 PDILTQ8N807 584 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 ITFG1Q8TB96 612 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 POMGNT1Q8WZA1 660 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 OXCT2Q9BYC2 517 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 IRF2BPLQ9H1B7 796 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 TBC1D7Q9P0N9 293 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 DNMT3BQ9UBC3 853 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 AGO2Q9UKV8 859 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 DERAQ9Y315 318 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 INSL5Q9Y5Q6 135 aa13.41□□□□□ -0.26
CTDNEP1-205ENST00000570828 SPTLC2O15270 562 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 RHOP08100 348 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ODC1P11926 461 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 MRE11P49959 708 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ADCY1Q08828 1119 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ALCAMQ13740 583 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 POSTNQ15063 836 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 L1TD1Q5T7N2 865 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 NPAS3Q8IXF0 933 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 LINC00301Q8NCQ3 95 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ST13P5Q8NFI4 369 aaPredicted RBP13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 GPR152Q8TDT2 470 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ING5Q8WYH8 240 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 FGF14Q92915 247 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 DNAJC19Q96DA6 116 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ACCSQ96QU6 501 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 PANK2Q9BZ23 570 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 ASB7Q9H672 318 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 OLFML3Q9NRN5 406 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 AFF4Q9UHB7 1163 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 CA14Q9ULX7 337 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 MAFFQ9ULX9 164 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 C2CD2Q9Y426 696 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 TIMM13Q9Y5L4 95 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms