RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 P3H1Q32P28 736 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 CCDC62Q6P9F0 684 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 FAM81AQ8TBF8 368 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 RBM41Q96IZ5 413 aaKnown RBP16.31■□□□□ 0.2
SMG6-207ENST00000570756 TRIM55Q9BYV6 548 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 PSMC3IPQ9P2W1 217 aaPredicted RBP16.31■□□□□ 0.2
SMG6-207ENST00000570756 ANGPTL2Q9UKU9 493 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 ATRNL1Q5VV63 1379 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 PDLIM1O00151 329 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 IRF6O14896 467 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 PSMC4P43686 418 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 SH3BGRP55822 239 aaPredicted RBP16.3■□□□□ 0.2
SMG6-207ENST00000570756 KLF1Q13351 362 aaPredicted RBP16.3■□□□□ 0.2
SMG6-207ENST00000570756 MFSD14BQ5SR56 506 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 PCNX4Q63HM2 1172 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 SHC3Q92529 594 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 KAT5Q92993 513 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 AMNQ9BXJ7 453 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 CD209Q9NNX6 404 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 PCMTD2Q9NV79 361 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.3■□□□□ 0.2
SMG6-207ENST00000570756 MYH11P35749 1972 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 PMM2O15305 246 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 SLITRK3O94933 977 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 PTP4A2Q12974 167 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 DYDC2Q96IM9 177 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 P2RX7Q99572 595 aaKnown RBP16.3■□□□□ 0.2
SMG6-207ENST00000570756 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 VPS37BQ9H9H4 285 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 CNTNAP4Q9C0A0 1308 aa16.3■□□□□ 0.2
SMG6-207ENST00000570756 F5H6K3 240 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 ZBED4O75132 1171 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 RALAP11233 206 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 KLRC2P26717 231 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 GSTT1P30711 240 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 ZBTB16Q05516 673 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 SLC27A3Q5K4L6 730 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 DCAF4Q8WV16 495 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 DDX27Q96GQ7 796 aaKnown RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 NACC1Q96RE7 527 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 HERPUD2Q9BSE4 406 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 METTL5Q9NRN9 209 aaKnown RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 ARL8BQ9NVJ2 186 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 HEY2Q9UBP5 337 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 SLC4A7Q9Y6M7 1214 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 ZNF831Q5JPB2 1677 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 NDC80O14777 642 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 ATP2A1O14983 1001 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 RAD21O60216 631 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 DNAJC6O75061 913 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 GRAPQ13588 217 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 KRT72Q14CN4 511 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 TBC1D25Q3MII6 688 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 PLEKHG4Q58EX7 1191 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 RASIP1Q5U651 963 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 PDCD7Q8N8D1 485 aaKnown RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 GRAPLQ8TC17 118 aaPredicted RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 TMEM174Q8WUU8 243 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 STRA6Q9BX79 667 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 HEMGNQ9BXL5 484 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 OSBPL8Q9BZF1 889 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 MTO1Q9Y2Z2 717 aaKnown RBP16.29■□□□□ 0.2
SMG6-207ENST00000570756 UMODL1Q5DID0 1318 aa16.29■□□□□ 0.2
SMG6-207ENST00000570756 A0A0G2JND7 137 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 CYP3A4P08684 503 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 KRT4P19013 534 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 ALCAMQ13740 583 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 CCNJLQ8IV13 435 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 DTX3LQ8TDB6 740 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 TRIM11Q96F44 468 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 PCIF1Q9H4Z3 704 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 ACP6Q9NPH0 428 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 AVENQ9NQS1 362 aaPredicted RBP16.28■□□□□ 0.2
SMG6-207ENST00000570756 K7ENM7 598 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 DNALI1O14645 258 aaPredicted RBP16.28■□□□□ 0.2
SMG6-207ENST00000570756 TM9SF1O15321 606 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 PSTPIP1O43586 416 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 ESRRAP11474 423 aaPredicted RBP16.28■□□□□ 0.2
SMG6-207ENST00000570756 IL1R1P14778 569 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 ARFIP2P53365 341 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 MAPK6Q16659 721 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 CLEC16AQ2KHT3 1053 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 XXYLT1Q8NBI6 393 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 AZIN2Q96A70 460 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 IWS1Q96ST2 819 aa16.28■□□□□ 0.2
SMG6-207ENST00000570756 CENPKQ9BS16 269 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms