RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 AP1M1Q9BXS5 423 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 STMN4Q9H169 189 aaPredicted RBP6.11□□□□□ -1.43
CDH13-213ENST00000569454 GOLPH3Q9H4A6 298 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 ELP3Q9H9T3 547 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 ZCCHC17Q9NP64 241 aaKnown RBP6.11□□□□□ -1.43
CDH13-213ENST00000569454 VTA1Q9NP79 307 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 TOPORSQ9NS56 1045 aaPredicted RBP6.11□□□□□ -1.43
CDH13-213ENST00000569454 PRMT7Q9NVM4 692 aaPredicted RBP6.11□□□□□ -1.43
CDH13-213ENST00000569454 ERAP1Q9NZ08 941 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 AMACRQ9UHK6 382 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 ANAPC7Q9UJX3 599 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 STRIP2Q9ULQ0 834 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 TRIOBPQ9H2D6 2365 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 CACNA1BQ00975 2339 aa6.11□□□□□ -1.43
CDH13-213ENST00000569454 EYSQ5T1H1 3165 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CNTNAP2Q9UHC6 1331 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ESYT3A0FGR9 886 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 TTI1O43156 1089 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 MED7O43513 233 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 HRO43593 1189 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 STRNO43815 780 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 B4GALT4O60513 344 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 PPFIA2O75334 1257 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CNMDO75829 334 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 PROSCO94903 275 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 VNN1O95497 513 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ECEL1O95672 775 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 GAS8O95995 478 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 HOXC6P09630 235 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 NUDT17P0C025 328 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 TMEM191BP0C7N4 346 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 P4HA1P13674 534 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ACO1P21399 889 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 PROZP22891 400 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 TMOD1P28289 359 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ECHS1P30084 290 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 POLR2BP30876 1174 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 ATICP31939 592 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 EPHX2P34913 555 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 GCLCP48506 637 aaPredicted RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 ACOT2P49753 483 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ZNF132P52740 706 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 NOMO3P69849 1222 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CDC42EP1Q00587 391 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 LMNB2Q03252 620 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 LAMTOR4Q0VGL1 99 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CALCOCO2Q13137 446 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 TRPC3Q13507 836 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 LAMC2Q13753 1193 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 TTLL12Q14166 644 aaPredicted RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 PCBP1Q15365 356 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDH13-213ENST00000569454 FAM187BQ17R55 369 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ZNF568Q3ZCX4 644 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 AGBL2Q5U5Z8 902 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 LRRC38Q5VT99 294 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 DCAF12L1Q5VU92 463 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 DUPD1Q68J44 220 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CCDC62Q6P9F0 684 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CRELD2Q6UXH1 353 aaPredicted RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 KDM7AQ6ZMT4 941 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 MON1BQ7L1V2 547 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 TMC3Q7Z5M5 1100 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 SPATS2Q86XZ4 545 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 NT5DC4Q86YG4 428 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 SLC13A5Q86YT5 568 aaPredicted RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 JAMLQ86YT9 394 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 RHOT1Q8IXI2 618 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 RNF149Q8NC42 400 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 RBBP8NLQ8NC74 664 aaPredicted RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 TSEN2Q8NCE0 465 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 TMEM35BQ8NCS4 154 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 BBOF1Q8ND07 529 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ZSWIM2Q8NEG5 633 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CCHCR1Q8TD31 782 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 PRPF31Q8WWY3 499 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 OPTNQ96CV9 577 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 RBM41Q96IZ5 413 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 ATP6V1G3Q96LB4 118 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 SPATA33Q96N06 139 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 ZIM3Q96PE6 472 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 POP1Q99575 1024 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 ACO2Q99798 780 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 TCHPQ9BT92 498 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 FOXP3Q9BZS1 431 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 MIS12Q9H081 205 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 LRRC19Q9H756 370 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 PARVAQ9NVD7 372 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 CPSF3Q9UKF6 684 aaKnown RBP6.1□□□□□ -1.43
CDH13-213ENST00000569454 PRDM4Q9UKN5 801 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 TNFSF13BQ9Y275 285 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 PCDHB4Q9Y5E5 795 aa6.1□□□□□ -1.43
CDH13-213ENST00000569454 SCN4AP35499 1836 aa6.09□□□□□ -1.43
CDH13-213ENST00000569454 RBM47A0AV96 593 aaKnown RBP6.09□□□□□ -1.43
CDH13-213ENST00000569454 ZSCAN5CA6NGD5 496 aaPredicted RBP6.09□□□□□ -1.43
CDH13-213ENST00000569454 TMEM110-MUSTN1A8MSY1 372 aa6.09□□□□□ -1.43
CDH13-213ENST00000569454 FSCN2O14926 492 aa6.09□□□□□ -1.43
CDH13-213ENST00000569454 DAPK3O43293 454 aa6.09□□□□□ -1.43
CDH13-213ENST00000569454 FAM189A1O60320 539 aa6.09□□□□□ -1.43
CDH13-213ENST00000569454 PPFIA4O75335 1185 aa6.09□□□□□ -1.43
CDH13-213ENST00000569454 GH1P01241 217 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms