RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 FGFR3P22607 806 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 IGFBP4P22692 258 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 CA8P35219 290 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 PIK3CAP42336 1068 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 AARSP49588 968 aaKnown RBP eCLIP9.81□□□□□ -0.843e-6■■■■■ 61.8
CHD9-219ENST00000569225 TPM4P67936 248 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 DSG1Q02413 1049 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 PPP3CAQ08209 521 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 SGSM1Q2NKQ1 1148 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 C1orf220Q5T0J3 134 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 METTL23Q86XA0 190 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 CEP57Q86XR8 500 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 RNF168Q8IYW5 571 aaPredicted RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 CDX2Q99626 313 aaPredicted RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 VN1R3Q9BXE9 311 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 EMILIN2Q9BXX0 1053 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 MMRN2Q9H8L6 949 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 CHST7Q9NS84 486 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 MTMR10Q9NXD2 777 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 KCNJ18B7U540 433 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 H7C4K7 107 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 I3L4J1 428 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 M0QZQ0 153 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 FSCN2O14926 492 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 P4HA2O15460 535 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 HUS1O60921 280 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 CXCL14O95715 111 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 AFPP02771 609 aaKnown RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 DNAJB1P25685 340 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 BRCC3P46736 316 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 TNNC1P63316 161 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 MYL7Q01449 175 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 KCNJ12Q14500 433 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 ZNF699Q32M78 642 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 PLPP4Q5VZY2 271 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 POTEHQ6S545 545 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 CD300LGQ6UXG3 332 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 C15orf39Q6ZRI6 1047 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 ANKS3Q6ZW76 656 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 AOPEPQ8N6M6 819 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 MRPL43Q8N983 215 aaKnown RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 FBXL13Q8NEE6 735 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 CXorf38Q8TB03 319 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 RIN2Q8WYP3 895 aaPredicted RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 FAM84AQ96KN4 292 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 SENP8Q96LD8 212 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 OXCT2Q9BYC2 517 aaPredicted RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 NSUN3Q9H649 340 aaKnown RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 GDAP2Q9NXN4 497 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 IRAK3Q9Y616 596 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 RALGAPA2Q2PPJ7 1873 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 LAMA2P24043 3122 aaKnown RBP9.8□□□□□ -0.84
CHD9-219ENST00000569225 CYB561D2O14569 222 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 SPTLC1O15269 473 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 PMM2O15305 246 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 CSPG5O95196 566 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 HLA-DRAP01903 254 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 TYMPP19971 482 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 FMO5P49326 533 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 ERVFC1P60507 584 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 MYL6P60660 151 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 CAMK1Q14012 370 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 PTPN14Q15678 1187 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 MAN2A1Q16706 1144 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 TCP11X2Q5H9J9 407 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 CDKAL1Q5VV42 579 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 KIAA0319Q5VV43 1072 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 IRF2BP1Q8IU81 584 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 TMEM86AQ8N2M4 240 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 TOP6BLQ8N6T0 577 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 SPATA18Q8TC71 538 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 MYLIPQ8WY64 445 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 PIK3R5Q8WYR1 880 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 GUCD1Q96NT3 240 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 TSPY26PQ9H489 355 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 VRTNQ9H8Y1 702 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 SAMSN1Q9NSI8 373 aaKnown RBP9.8□□□□□ -0.84
CHD9-219ENST00000569225 FANCLQ9NW38 375 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 SNX9Q9Y5X1 595 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 MTCH2Q9Y6C9 303 aa9.8□□□□□ -0.84
CHD9-219ENST00000569225 C2orf71A6NGG8 1288 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 GOLGA6L19H0YKK7 550 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 C2CD2LO14523 706 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 NCK2O43639 380 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 VNN1O95497 513 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 CST3P01034 146 aaPredicted RBP9.79□□□□□ -0.84
CHD9-219ENST00000569225 ADH1AP07327 375 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 CDK11BP21127 795 aaKnown RBP9.79□□□□□ -0.84
CHD9-219ENST00000569225 TKTP29401 623 aaKnown RBP9.79□□□□□ -0.84
CHD9-219ENST00000569225 YWHAHQ04917 246 aaPredicted RBP9.79□□□□□ -0.84
CHD9-219ENST00000569225 KCNH2Q12809 1159 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 ADGRE1Q14246 886 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 PSMD5Q16401 504 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 WDR72Q3MJ13 1102 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 ZNF667Q5HYK9 610 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 RTP2Q5QGT7 225 aa9.79□□□□□ -0.84
CHD9-219ENST00000569225 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms