RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 NXF1Q9UBU9 619 aaKnown RBP15.34■□□□□ 0.05
KLHDC4-222ENST00000568444 KPNA7A9QM74 516 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 TMEM189-UBE2V1I3L0A0 370 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 I3L4J1 428 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SPTLC1O15269 473 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 TRAPPC3O43617 180 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 LRRN2O75325 713 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 ARHGEF15O94989 841 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 ASS1P00966 412 aaKnown RBP15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 P4HA1P13674 534 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SLC9A1P19634 815 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 IGFBP6P24592 240 aaPredicted RBP15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 DNAJB2P25686 324 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SMAD3P84022 425 aaKnown RBP15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SYCP1Q15431 976 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 PTPN21Q16825 1174 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 WDR72Q3MJ13 1102 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SARM1Q6SZW1 724 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 TMEM173Q86WV6 379 aaPredicted RBP15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 IGSF21Q96ID5 467 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 NT5C1BQ96P26 610 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 TGS1Q96RS0 853 aaKnown RBP15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 C17orf80Q9BSJ5 609 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 XYLT2Q9H1B5 865 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SLC28A3Q9HAS3 691 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 POLIQ9UNA4 740 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SNX9Q9Y5X1 595 aa15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 SF3B1O75533 1304 aaKnown RBP eCLIP15.33■□□□□ 0.04
KLHDC4-222ENST00000568444 STAU1O95793 577 aaKnown RBP15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 LINC00271P0C7V0 271 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 ODC1P11926 461 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 PAX3P23760 479 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 PON1P27169 355 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 BMPR1AP36894 532 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 KLK7P49862 253 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 TAP1Q03518 808 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 KCNMA1Q12791 1236 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 NR1I3Q14994 352 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 FUT10Q6P4F1 479 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 TRIM65Q6PJ69 517 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 SPRED2Q7Z698 418 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 BCL7CQ8WUZ0 217 aaPredicted RBP15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 TIFAQ96CG3 184 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 SENP8Q96LD8 212 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 SAMD11Q96NU1 681 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 GRPEL1Q9HAV7 217 aa15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 APOBEC3GQ9HC16 384 aaKnown RBP15.32■□□□□ 0.04
KLHDC4-222ENST00000568444 CYB561D2O14569 222 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 AP5Z1O43299 807 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 HUS1O60921 280 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 FGF18O76093 207 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 KRT17Q04695 432 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 ELAVL2Q12926 359 aaKnown RBP15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 GSE1Q14687 1217 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 TIGD5Q53EQ6 642 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 CD300LGQ6UXG3 332 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 PPM1KQ8N3J5 372 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 KLHL23Q8NBE8 558 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 NEK11Q8NG66 645 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 LMO3Q8TAP4 145 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 TATDN2Q93075 761 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 SUSD3Q96L08 255 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 ERGIC2Q96RQ1 377 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 PLVAPQ9BX97 442 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 NIF3L1Q9GZT8 377 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 VRTNQ9H8Y1 702 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 CERS4Q9HA82 394 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 FAM207AQ9NSI2 230 aaPredicted RBP15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 APEX2Q9UBZ4 518 aa15.31■□□□□ 0.04
KLHDC4-222ENST00000568444 ARHGEF37A1IGU5 675 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 CSPG5O95196 566 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 SCN1AP35498 2009 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 RAP1GAPP47736 663 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 AARSP49588 968 aaKnown RBP eCLIP15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 APBA1Q02410 837 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 LRIT3Q3SXY7 679 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 FAM171A1Q5VUB5 890 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 RRAGAQ7L523 313 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 CEP57Q86XR8 500 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 ARHGEF19Q8IW93 802 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 APPL2Q8NEU8 664 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 ARNTL2Q8WYA1 636 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 C11orf84Q9BUA3 381 aaPredicted RBP15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 GPR62Q9BZJ7 368 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 SMYD3Q9H7B4 428 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 GDAP2Q9NXN4 497 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 SIK3Q9Y2K2 1263 aa15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 TIMM13Q9Y5L4 95 aaPredicted RBP15.3■□□□□ 0.04
KLHDC4-222ENST00000568444 A0A1W2PQC6 194 aa15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 FSD2A1L4K1 749 aa15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 M0QZQ0 153 aa15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 RB1P06400 928 aa15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 TBXAS1P24557 533 aaPredicted RBP15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 TKTP29401 623 aaKnown RBP15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 CA8P35219 290 aa15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 ZNF75DP51815 510 aa15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 ERVK-21P61565 698 aa15.29■□□□□ 0.04
KLHDC4-222ENST00000568444 CUL2Q13617 745 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms