RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 CCDC105Q8IYK2 499 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 SIX5Q8N196 739 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 SMG7Q92540 1137 aaKnown RBP10.31□□□□□ -0.76
SF3B3-211ENST00000568291 KCNN1Q92952 543 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 DDX27Q96GQ7 796 aaKnown RBP10.31□□□□□ -0.76
SF3B3-211ENST00000568291 UROC1Q96N76 676 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 PLEKHA5Q9HAU0 1116 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 KCNK12Q9HB15 430 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 EXOC7Q9UPT5 735 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 HPSEQ9Y251 543 aa10.31□□□□□ -0.76
SF3B3-211ENST00000568291 PATJQ8NI35 1801 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 TMEM189-UBE2V1I3L0A0 370 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 CCL16O15467 120 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 TGFB1I1O43294 461 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 NARSO43776 548 aaKnown RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 KLRC4O43908 158 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 OR4Q2P0C623 313 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 NPR3P17342 541 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 RFX1P22670 979 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 RPL9P32969 192 aaKnown RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 SYKP43405 635 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 CYP2J2P51589 502 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 TFAMQ00059 246 aaKnown RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 STK4Q13043 487 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 TMEM132DQ14C87 1099 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 KMT5BQ4FZB7 885 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 VARS2Q5ST30 1063 aaKnown RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 SPATA1Q5VX52 437 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 ARMCX5Q6P1M9 558 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 UNC13DQ70J99 1090 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 EPM2AIP1Q7L775 607 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 CBWD2Q8IUF1 395 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 SCFD1Q8WVM8 642 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 ERCC4Q92889 916 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 NKD2Q969F2 451 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 HVCN1Q96D96 273 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 RTP3Q9BQQ7 232 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 LRRC27Q9C0I9 530 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 SCAND2PQ9GZW5 306 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 PDE11AQ9HCR9 933 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 WDR6Q9NNW5 1121 aaKnown RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 FNIP2Q9P278 1114 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 IGSF9Q9P2J2 1179 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 DPP7Q9UHL4 492 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 UBQLN1Q9UMX0 589 aaKnown RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 MAPK8IP1Q9UQF2 711 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 EP300Q09472 2414 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-211ENST00000568291 CFAP54Q96N23 3096 aa10.3□□□□□ -0.76
SF3B3-211ENST00000568291 TRAPPC3O43617 180 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 PI15O43692 258 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 ADRB2P07550 413 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 CFHP08603 1231 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 SCP2P22307 547 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 LRPAP1P30533 357 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 EHHADHQ08426 723 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 ELAVL2Q12926 359 aaKnown RBP10.29□□□□□ -0.76
SF3B3-211ENST00000568291 POSTNQ15063 836 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 ANGPT1Q15389 498 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 CTXN3Q4LDR2 81 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 C9orf57Q5W0N0 161 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 CYP26C1Q6V0L0 522 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 DSTYKQ6XUX3 929 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 GET4Q7L5D6 327 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-211ENST00000568291 DTWD2Q8NBA8 298 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 BEST2Q8NFU1 509 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 SLC7A14Q8TBB6 771 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 ZNF507Q8TCN5 953 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 RSAD2Q8WXG1 361 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 ELMO3Q96BJ8 720 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 SUSD3Q96L08 255 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 MYADMQ96S97 322 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 RHOBTB2Q9BYZ6 727 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 TMEM206Q9H813 350 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 PIDD1Q9HB75 910 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.29□□□□□ -0.76
SF3B3-211ENST00000568291 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 RBAKQ9NYW8 714 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-211ENST00000568291 HSPBP1Q9NZL4 362 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 EPS15L1Q9UBC2 864 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 MTRRQ9UBK8 725 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 FBXL5Q9UKA1 691 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 ATP6V1DQ9Y5K8 247 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 PTPRJQ12913 1337 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
SF3B3-211ENST00000568291 CITO14578 2027 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 PVALEFA0A1B0GWK0 134 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 STK25O00506 426 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 EXTL3O43909 919 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 ZNF202O95125 648 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 SEC24AO95486 1093 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 RPN1P04843 607 aaKnown RBP10.28□□□□□ -0.76
SF3B3-211ENST00000568291 C8AP07357 584 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 CYP3A5P20815 502 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 LILRA4P59901 499 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms