RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 ABHD15Q6UXT9 468 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 STXBP4Q6ZWJ1 553 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 IRF2BP1Q8IU81 584 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 LRRC8AQ8IWT6 810 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 ABRAQ8N0Z2 381 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 ANKRD13CQ8N6S4 541 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 RBBP8NLQ8NC74 664 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 KIAA0895Q8NCT3 520 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 ATP6V0A1Q93050 837 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 CCDC74BQ96LY2 380 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 PTPN18Q99952 460 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 REEP2Q9BRK0 252 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 TIPINQ9BVW5 301 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 VPS16Q9H269 839 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 MRPL44Q9H9J2 332 aaKnown RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 MLXIPQ9HAP2 919 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 PARVGQ9HBI0 331 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 NRBP2Q9NSY0 501 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 WRAP73Q9P2S5 460 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 GABBR1Q9UBS5 961 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 MORF4L1Q9UBU8 362 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 SEL1LQ9UBV2 794 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 KCNG1Q9UIX4 513 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 ZKSCAN5Q9Y2L8 839 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 TRIM49BA6NDI0 452 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 PRR33A8MZF0 331 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 IGF2BP3O00425 579 aaKnown RBP eCLIP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 RGS13O14921 159 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 CETN3O15182 167 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 NRDCO43847 1150 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 CALUO43852 315 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 UBOX5O94941 541 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 GNA14O95837 355 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 WNT11O96014 354 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 ACRP10323 421 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 RPL13P26373 211 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 MTIF2P46199 727 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 RARRES1P49788 294 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 COPB1P53618 953 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 UBXN1Q04323 297 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 ADAM9Q13443 819 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 KNOP1Q1ED39 458 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF792Q3KQV3 632 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 CCDC144BQ3MJ40 725 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 XKR9Q5GH70 373 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 SPECC1LQ69YQ0 1117 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 RGMBQ6NW40 437 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 RUFY4Q6ZNE9 571 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 APTXQ7Z2E3 356 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF720Q7Z2F6 126 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 DPP9Q86TI2 863 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 PPFIBP1Q86W92 1011 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 LSRQ86X29 649 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 SFR1Q86XK3 245 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 NELFCDQ8IXH7 590 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 SLC17A8Q8NDX2 589 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 MORC4Q8TE76 937 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 SCFD1Q8WVM8 642 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 SEPT1Q8WYJ6 367 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 SHDQ96IW2 340 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 CCDC43Q96MW1 224 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 PARK7Q99497 189 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 PORCNQ9H237 461 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 R3HDMLQ9H3Y0 253 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 BCAS3Q9H6U6 928 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 POLD4Q9HCU8 107 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 ZCCHC17Q9NP64 241 aaKnown RBP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 SLC5A4Q9NY91 659 aa6.74□□□□□ -1.33
CAPN3-218ENST00000568153 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.74□□□□□ -1.33
CAPN3-218ENST00000568153 WDR90Q96KV7 1748 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SLC15A5A6NIM6 579 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 RSPH10B2B2RC85 870 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 PES1O00541 588 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 PDXKO00764 312 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TNFRSF10CO14798 259 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TEX33O43247 280 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF500O60304 480 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 HIP1RO75146 1068 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 PRPF6O94906 941 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 STBD1O95210 358 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 GCNT3O95395 438 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TPM1P09493 284 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SUPT20HL2P0C7V6 817 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 RSPH10BP0C881 870 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SKILP12757 684 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 PLS3P13797 630 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 MAPK4P31152 587 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 DNAJA1P31689 397 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 GBP1P32455 592 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 ETV3P41162 512 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 GIPRP48546 466 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 DNM2P50570 870 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 STAT5BP51692 787 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF131P52739 623 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SP4Q02446 784 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TBX2Q13207 712 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms