RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ABL1P00519 1130 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PSAPP07602 524 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ATF2P15336 505 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 LRPAP1P30533 357 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 GEN1Q17RS7 908 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 LRRC36Q1X8D7 754 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PDCD4Q53EL6 469 aaKnown RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 HPS3Q969F9 1004 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 KRT12Q99456 494 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ATPIF1Q9UII2 106 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 SLC8A2Q9UPR5 921 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 RBAK-RBAKDNI3L0D1 243 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 GSNP06396 782 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 XPAP23025 273 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 HOXD10P28358 340 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 BACE1P56817 501 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 LRRC63Q05C16 580 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 CCNI2Q6ZMN8 369 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 KIRREL3Q8IZU9 778 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ARL10Q8N8L6 244 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 TTC25Q96NG3 672 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 DACH2Q96NX9 599 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 KCNK16Q96T55 309 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 THAP9Q9H5L6 903 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 FBXL5Q9UKA1 691 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 FGFR4P22455 802 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ADCY1Q08828 1119 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 COG2Q14746 738 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PTPROQ16827 1216 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 SCARA5Q6ZMJ2 495 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 MCRS1Q96EZ8 462 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 FAM193BQ96PV7 902 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 MTIF3Q9H2K0 278 aaKnown RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 AIPL1Q9NZN9 384 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 SEL1LQ9UBV2 794 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 WARS2Q9UGM6 360 aaKnown RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 CAPN11Q9UMQ6 739 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 TYW5A2RUC4 315 aaKnown RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 A8MXQ7 604 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 AP3B1O00203 1094 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ATP5BP06576 529 aaKnown RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PTPRAP18433 802 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ANXA13P27216 316 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 IFNAR2P48551 515 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 MAP3K10Q02779 954 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 GET4Q7L5D6 327 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 GPR141Q7Z602 305 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ADCK1Q86TW2 530 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 TTC30AQ86WT1 665 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 MINDY2Q8NBR6 621 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 GCNAQ96QF7 691 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ROPN1BQ9BZX4 212 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ROPN1Q9HAT0 212 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 KBTBD13C9JR72 458 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 CPA3P15088 417 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 DLG4P78352 724 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ZBED6P86452 979 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ZNF543Q08ER8 600 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 POTEGQ6S5H5 508 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 IQCF2Q8IXL9 164 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 HPS1Q92902 700 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 RNF34Q969K3 372 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 CEP170P1Q96L14 293 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 FANCEQ9HB96 536 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 SPATA7Q9P0W8 599 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 FBXO2Q9UK22 296 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 SMG5Q9UPR3 1016 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 PDLIM1O00151 329 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 KCNK3O14649 394 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ZC3H11AO75152 810 aaKnown RBP eCLIP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 CTDNEP1O95476 244 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 TXNP10599 105 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 GARSP41250 739 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 JAG1P78504 1218 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 PPIDQ08752 370 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 PDAP1Q13442 181 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 PAN2Q504Q3 1202 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 SGO2Q562F6 1265 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 C11orf74Q86VG3 221 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 LRRC71Q8N4P6 559 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 FAM133AQ8N9E0 248 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 OR9Q1Q8NGQ5 310 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 C19orf60Q96EN9 201 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 WWP1Q9H0M0 922 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 EMILIN3Q9NT22 766 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 DNAJC12Q9UKB3 198 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 FNDC3AQ9Y2H6 1198 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ORC4O43929 436 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 MFAP3LO75121 409 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 RPN1P04843 607 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 EEF1B2P24534 225 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 GSTT1P30711 240 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 HIC1Q14526 733 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ZNF658Q5TYW1 1059 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 PDZD4Q76G19 769 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 PLEKHH3Q7Z736 793 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 GIPC2Q8TF65 315 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms