RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 R3HCC1Q9Y3T6 440 aaKnown RBP18.04■□□□□ 0.48
CLN6-208ENST00000567060 ANO9A1A5B4 782 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 SYCE3A1L190 88 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 CASTOR2A6NHX0 329 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 PODXLO00592 558 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 FGF18O76093 207 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 DLATP10515 647 aaKnown RBP18.03■□□□□ 0.48
CLN6-208ENST00000567060 SOX4Q06945 474 aaPredicted RBP18.03■□□□□ 0.48
CLN6-208ENST00000567060 TRIM67Q6ZTA4 783 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 DDX53Q86TM3 631 aaKnown RBP18.03■□□□□ 0.48
CLN6-208ENST00000567060 LRRC52Q8N7C0 313 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 KLHL23Q8NBE8 558 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 SPPL3Q8TCT6 385 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 CCDC127Q96BQ5 260 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 ZNF560Q96MR9 790 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 ANP32EQ9BTT0 268 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 CXCL16Q9H2A7 254 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 ADAM28Q9UKQ2 775 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 SSX2IPQ9Y2D8 614 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 ZDBF2Q9HCK1 2354 aa18.03■□□□□ 0.48
CLN6-208ENST00000567060 SF3B1O75533 1304 aaKnown RBP eCLIP18.02■□□□□ 0.486e-9■■■■■ 118.2
CLN6-208ENST00000567060 TMEM221A6NGB7 291 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 LOC730098B7Z3J9 87 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 M0R296 226 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 PIRO00625 290 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 PMM2O15305 246 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 B4GALT3O60512 393 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 TADA2AO75478 443 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 B3GAT3O94766 335 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 ITGB1P05556 798 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 CLCNKBP51801 687 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 RBP5P82980 135 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 MYL5Q02045 173 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 TCF15Q12870 199 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 CCDC40Q4G0X9 1142 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 C9orf57Q5W0N0 161 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 ADGRD2Q7Z7M1 963 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 C18orf25Q96B23 403 aaPredicted RBP18.02■□□□□ 0.48
CLN6-208ENST00000567060 MARCH5Q9NX47 278 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 HCSTQ9UBK5 93 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 TUBGCP4Q9UGJ1 667 aa18.02■□□□□ 0.48
CLN6-208ENST00000567060 LRRIQ3A6PVS8 624 aaPredicted RBP18.01■□□□□ 0.47
CLN6-208ENST00000567060 SMTNL1A8MU46 457 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 N4BP1O75113 896 aaKnown RBP18.01■□□□□ 0.47
CLN6-208ENST00000567060 STAU1O95793 577 aaKnown RBP18.01■□□□□ 0.47
CLN6-208ENST00000567060 EFEMP2O95967 443 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 AARSP49588 968 aaKnown RBP eCLIP18.01■□□□□ 0.471e-7■■■■■ 41.2
CLN6-208ENST00000567060 WNT7BP56706 349 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 SPAG1Q07617 926 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 ZACNQ401N2 412 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 PDXDC1Q6P996 788 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 TRAPPC11Q7Z392 1133 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 RNF168Q8IYW5 571 aaPredicted RBP18.01■□□□□ 0.47
CLN6-208ENST00000567060 C1orf127Q8N9H9 656 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 SMRP1Q8NCR6 262 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 PBXIP1Q96AQ6 731 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 MED15Q96RN5 788 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 MTMR12Q9C0I1 747 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 DNAJC25Q9H1X3 360 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 TMEM8AQ9HCN3 771 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 MAGEC2Q9UBF1 373 aaPredicted RBP18.01■□□□□ 0.47
CLN6-208ENST00000567060 PRG3Q9Y2Y8 225 aaPredicted RBP18.01■□□□□ 0.47
CLN6-208ENST00000567060 NUB1Q9Y5A7 615 aa18.01■□□□□ 0.47
CLN6-208ENST00000567060 ZFHX2Q9C0A1 2572 aaPredicted RBP18■□□□□ 0.47
CLN6-208ENST00000567060 SYN3O14994 580 aa18■□□□□ 0.47
CLN6-208ENST00000567060 P4HA2O15460 535 aa18■□□□□ 0.47
CLN6-208ENST00000567060 GLP2RO95838 553 aa18■□□□□ 0.47
CLN6-208ENST00000567060 SOD2P04179 222 aa18■□□□□ 0.47
CLN6-208ENST00000567060 EEF1GP26641 437 aaKnown RBP18■□□□□ 0.47
CLN6-208ENST00000567060 ATICP31939 592 aa18■□□□□ 0.47
CLN6-208ENST00000567060 NDUFV1P49821 464 aa18■□□□□ 0.47
CLN6-208ENST00000567060 TAF6P49848 677 aa18■□□□□ 0.47
CLN6-208ENST00000567060 ZXDAP98168 799 aa18■□□□□ 0.47
CLN6-208ENST00000567060 MYO1EQ12965 1108 aa18■□□□□ 0.47
CLN6-208ENST00000567060 CBX2Q14781 532 aaPredicted RBP18■□□□□ 0.47
CLN6-208ENST00000567060 SV2CQ496J9 727 aa18■□□□□ 0.47
CLN6-208ENST00000567060 ANO6Q4KMQ2 910 aa18■□□□□ 0.47
CLN6-208ENST00000567060 KRT39Q6A163 491 aa18■□□□□ 0.47
CLN6-208ENST00000567060 FUT10Q6P4F1 479 aa18■□□□□ 0.47
CLN6-208ENST00000567060 C11orf57Q6ZUT1 292 aaPredicted RBP18■□□□□ 0.47
CLN6-208ENST00000567060 EFHBQ8N7U6 833 aa18■□□□□ 0.47
CLN6-208ENST00000567060 SPATA18Q8TC71 538 aa18■□□□□ 0.47
CLN6-208ENST00000567060 PLEKHO2Q8TD55 490 aa18■□□□□ 0.47
CLN6-208ENST00000567060 TAF4BQ92750 862 aa18■□□□□ 0.47
CLN6-208ENST00000567060 FAXDC2Q96IV6 333 aa18■□□□□ 0.47
CLN6-208ENST00000567060 GZF1Q9H116 711 aaPredicted RBP18■□□□□ 0.47
CLN6-208ENST00000567060 GOLGA2P5Q9HBQ8 144 aa18■□□□□ 0.47
CLN6-208ENST00000567060 NGRNQ9NPE2 291 aaKnown RBP18■□□□□ 0.47
CLN6-208ENST00000567060 NFE2L3Q9Y4A8 694 aa18■□□□□ 0.47
CLN6-208ENST00000567060 FSD2A1L4K1 749 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 KIF4AO95239 1232 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 C4BPAP04003 597 aaKnown RBP17.99■□□□□ 0.47
CLN6-208ENST00000567060 ZNF165P49910 485 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 CREMQ03060 361 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 CETN1Q12798 172 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 USP41Q3LFD5 358 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.99■□□□□ 0.47
CLN6-208ENST00000567060 C15orf39Q6ZRI6 1047 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 TRIM59Q8IWR1 403 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 OR5B17Q8NGF7 314 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms