RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PLD1Q13393 1074 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 FAM78AQ5JUQ0 283 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 SPATA1Q5VX52 437 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 RNF19BQ6ZMZ0 732 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 USP37Q86T82 979 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 E2F7Q96AV8 911 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 TCEAL4Q96EI5 215 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 TRMT61BQ9BVS5 477 aaKnown RBP16.3■□□□□ 0.2
RNF40-209ENST00000566703 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 TRPV4Q9HBA0 871 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
RNF40-209ENST00000566703 CEP72Q9P209 647 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 MTF2Q9Y483 593 aaPredicted RBP16.3■□□□□ 0.2
RNF40-209ENST00000566703 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
RNF40-209ENST00000566703 CD2BP2O95400 341 aaKnown RBP16.29■□□□□ 0.2
RNF40-209ENST00000566703 FCARP24071 287 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 DDIT3P35638 169 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 TNFSF9P41273 254 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 CCR2P41597 374 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 GTF2BQ00403 316 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 SPAG1Q07617 926 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 MYBPC2Q14324 1141 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
RNF40-209ENST00000566703 DSTYKQ6XUX3 929 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 MAMSTRQ6ZN01 415 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 TPRG1Q6ZUI0 275 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 DEPDC1BQ8WUY9 529 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 RAD54LQ92698 747 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 IRF7Q92985 503 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 ST6GALNAC4Q9H4F1 302 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 BRD9Q9H8M2 597 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 ASAH2Q9NR71 780 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 HSFX1Q9UBD0 423 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 CPSF3Q9UKF6 684 aaKnown RBP16.29■□□□□ 0.2
RNF40-209ENST00000566703 DERAQ9Y315 318 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 CITO14578 2027 aa16.29■□□□□ 0.2
RNF40-209ENST00000566703 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 MOSPD3O75425 235 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 KRT18P05783 430 aaKnown RBP16.28■□□□□ 0.2
RNF40-209ENST00000566703 PSMC3P17980 439 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 TARSP26639 723 aaKnown RBP16.28■□□□□ 0.2
RNF40-209ENST00000566703 ID4P47928 161 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 MLLT6P55198 1093 aaPredicted RBP16.28■□□□□ 0.2
RNF40-209ENST00000566703 LILRA4P59901 499 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 FZD5Q13467 585 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 MCM6Q14566 821 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 SLFN12LQ6IEE8 588 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 ERMP1Q7Z2K6 904 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 MAP4K3Q8IVH8 894 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 HS6ST3Q8IZP7 471 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 FIZ1Q96SL8 496 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 IER2Q9BTL4 223 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 MSTO1Q9BUK6 570 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 ASB7Q9H672 318 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 ASB3Q9Y575 518 aa16.28■□□□□ 0.2
RNF40-209ENST00000566703 K7ENM7 598 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 SPTLC1O15269 473 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 KINO60870 393 aaKnown RBP16.27■□□□□ 0.2
RNF40-209ENST00000566703 MYL4P12829 197 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 PLCG1P19174 1290 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 CD72P21854 359 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 ALDH1A3P47895 512 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 EPHB3P54753 998 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.2
RNF40-209ENST00000566703 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.2
RNF40-209ENST00000566703 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.2
RNF40-209ENST00000566703 OVOS1Q6IE37 1185 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 CENPPQ6IPU0 288 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 ARMCX5Q6P1M9 558 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 MFSD6LQ8IWD5 586 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 LRRC15Q8TF66 581 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 LARP4BQ92615 738 aaKnown RBP16.27■□□□□ 0.2
RNF40-209ENST00000566703 RUBCNQ92622 972 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 ZSWIM3Q96MP5 696 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 LRRC3Q9BY71 257 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 ZNF334Q9HCZ1 680 aaPredicted RBP16.27■□□□□ 0.2
RNF40-209ENST00000566703 HEBP1Q9NRV9 189 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 YIPF1Q9Y548 306 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 PCDHGA2Q9Y5H1 932 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 TIMM13Q9Y5L4 95 aaPredicted RBP16.27■□□□□ 0.2
RNF40-209ENST00000566703 STYXL1Q9Y6J8 313 aa16.27■□□□□ 0.2
RNF40-209ENST00000566703 FAM186AA6NE01 2351 aa16.27■□□□□ 0.19
RNF40-209ENST00000566703 ANO9A1A5B4 782 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 SHISA7A6NL88 538 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 PIRO00625 290 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
RNF40-209ENST00000566703 VNN2O95498 520 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 CYP11A1P05108 521 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 CSTF1Q05048 431 aaKnown RBP16.26■□□□□ 0.19
RNF40-209ENST00000566703 DUSP4Q13115 394 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 C9orf57Q5W0N0 161 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 JADE1Q6IE81 842 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 SLC39A4Q6P5W5 647 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 VITQ6UXI7 678 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 KRI1Q8N9T8 703 aaKnown RBP16.26■□□□□ 0.19
RNF40-209ENST00000566703 SUMF1Q8NBK3 374 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 RASSF8Q8NHQ8 419 aa16.26■□□□□ 0.19
RNF40-209ENST00000566703 ZSCAN18Q8TBC5 510 aaPredicted RBP16.26■□□□□ 0.19
RNF40-209ENST00000566703 NELL1Q92832 810 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms