RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 PTPRJQ12913 1337 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 CCDC195A0A1B0GUA6 201 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 C19orf67A6NJJ6 358 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 PDXKO00764 312 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 RFPL2O75678 378 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 TMEM191BP0C7N4 346 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 PAX3P23760 479 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 POLR2BP30876 1174 aaKnown RBP13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 TAF6P49848 677 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 CYP24A1Q07973 514 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 PSMD6Q15008 389 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 SURF1Q15526 300 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 CTXN3Q4LDR2 81 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 SLC8B1Q6J4K2 584 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 ZNF280DQ6N043 979 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 GPR149Q86SP6 731 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 CMASQ8NFW8 434 aaPredicted RBP13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 ERCC4Q92889 916 aaPredicted RBP13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 SENP8Q96LD8 212 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 POP1Q99575 1024 aaKnown RBP13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 MTMR12Q9C0I1 747 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 POMKQ9H5K3 350 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 INTS13Q9NVM9 706 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 FBXL5Q9UKA1 691 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 MAPK8IP1Q9UQF2 711 aa13.92□□□□□ -0.18
CNEP1R1-208ENST00000566482 EXOC3O60645 756 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 KIF20AO95235 890 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 SMC2O95347 1197 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 NR3C1P04150 777 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ITGB3P05106 788 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ODC1P11926 461 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 TYMPP19971 482 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ARPP19P56211 112 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ROR1Q01973 937 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 YWHAHQ04917 246 aaPredicted RBP13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 SV2CQ496J9 727 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 SCARA3Q6AZY7 606 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 C15orf39Q6ZRI6 1047 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 USP37Q86T82 979 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 SLC9A9Q8IVB4 645 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 SMYD4Q8IYR2 804 aaPredicted RBP13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 GJD3Q8N144 294 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 GUF1Q8N442 669 aaKnown RBP13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 CSGALNACT2Q8N6G5 542 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 OR5B17Q8NGF7 314 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 CXorf38Q8TB03 319 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ZNF707Q96C28 371 aaPredicted RBP13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ANKRD36BP1Q96IX9 119 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ZNF560Q96MR9 790 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 NECTIN4Q96NY8 510 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 RMND1Q9NWS8 449 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ZDHHC7Q9NXF8 308 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 SIX4Q9UIU6 781 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 HOOK1Q9UJC3 728 aaKnown RBP13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 ITGA11Q9UKX5 1188 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 AGAP1Q9UPQ3 857 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 PCDHA5Q9Y5H7 936 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 SCN1AP35498 2009 aa13.91□□□□□ -0.18
CNEP1R1-208ENST00000566482 MTCL1Q9Y4B5 1905 aaKnown RBP13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 WDR27A2RRH5 827 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 LOC730098B7Z3J9 87 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 CYB561D2O14569 222 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 CALUO43852 315 aaPredicted RBP13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 ZMYND10O75800 440 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 OAZ2O95190 189 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 PAPLNO95428 1278 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 TNNC2P02585 160 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 CYP11A1P05108 521 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 PNPLA4P41247 253 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 UBE2HP62256 183 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 DUOXA2Q1HG44 320 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 ATAT1Q5SQI0 421 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 LIN9Q5TKA1 542 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 OVOS1Q6IE37 1185 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 WDR49Q8IV35 697 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 LRRC52Q8N7C0 313 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 SPATA20Q8TB22 786 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 SMG7Q92540 1137 aaKnown RBP13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 SMARCE1Q969G3 411 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 RPGRIP1Q96KN7 1286 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 MFSD14AQ96MC6 490 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 GSDMAQ96QA5 445 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 TRAF3IP3Q9Y228 551 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 TSC2P49815 1807 aa13.9□□□□□ -0.18
CNEP1R1-208ENST00000566482 TTC28Q96AY4 2481 aa13.89□□□□□ -0.19
CNEP1R1-208ENST00000566482 C2orf16Q68DN1 1984 aa13.89□□□□□ -0.19
CNEP1R1-208ENST00000566482 ARHGEF37A1IGU5 675 aa13.89□□□□□ -0.19
CNEP1R1-208ENST00000566482 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
CNEP1R1-208ENST00000566482 ABLIM3O94929 683 aa13.89□□□□□ -0.19
CNEP1R1-208ENST00000566482 C8AP07357 584 aa13.89□□□□□ -0.19
CNEP1R1-208ENST00000566482 KRT19P08727 400 aa13.89□□□□□ -0.19
CNEP1R1-208ENST00000566482 CPB1P15086 417 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms