RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 LRRC43Q8N309 656 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 RNF10Q8N5U6 811 aaKnown RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 ZNF516Q92618 1163 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 PPP1R13BQ96KQ4 1090 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 PPP1R10Q96QC0 940 aaKnown RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 NHEJ1Q9H9Q4 299 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 NLRC4Q9NPP4 1024 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 DSEQ9UL01 958 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 INPP5FQ9Y2H2 1132 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 NUB1Q9Y5A7 615 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 FHOD1Q9Y613 1164 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 LRRC53A6NM62 1247 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 F8VZ95 297 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 PJA2O43164 708 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 HUS1O60921 280 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 FGBP02675 491 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 IBSPP21815 317 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-207ENST00000566095 PDE6CP51160 858 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 SCNN1GP51170 649 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 MYL6P60660 151 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 PTK2Q05397 1052 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 KLHL30Q0D2K2 578 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 ELAVL2Q12926 359 aaKnown RBP10.52□□□□□ -0.73
SF3B3-207ENST00000566095 DRAP1Q14919 205 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-207ENST00000566095 SLC18A3Q16572 532 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 WDR72Q3MJ13 1102 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 C9orf57Q5W0N0 161 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 HGSNATQ68CP4 663 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 IQCEQ6IPM2 695 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 METTL23Q86XA0 190 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 ZNF677Q86XU0 584 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 C7orf61Q8IZ16 206 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 DPF3Q92784 378 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 MMS19Q96T76 1030 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 TMEM175Q9BSA9 504 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 SIX2Q9NPC8 291 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 CEP83Q9Y592 693 aa10.52□□□□□ -0.73
SF3B3-207ENST00000566095 CENPFP49454 3210 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 ANO9A1A5B4 782 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 TRIM43BA6NCK2 446 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 CCDC85CA6NKD9 419 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 RNF225M0QZC1 329 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-207ENST00000566095 PODXLO00592 558 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 PIRO00625 290 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 MED7O43513 233 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 KIF5CO60282 957 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 VNN1O95497 513 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 KRT5P13647 590 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 TNNT1P13805 278 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 CSF2RAP15509 400 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 USP8P40818 1118 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 KLK7P49862 253 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 VAV2P52735 878 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 TCEAL1Q15170 157 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 STILQ15468 1287 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 ARHGAP44Q17R89 818 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 ARHGAP29Q52LW3 1261 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 GLRA4Q5JXX5 417 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 DCLRE1AQ6PJP8 1040 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 RAD9BQ6WBX8 426 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 DSTYKQ6XUX3 929 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 IRF2BP2Q7Z5L9 587 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 TMEM86AQ8N2M4 240 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 TOP6BLQ8N6T0 577 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 APPL2Q8NEU8 664 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 HELQQ8TDG4 1101 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 SHC3Q92529 594 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 SEMA4DQ92854 862 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 LPPQ93052 612 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 TRIM43Q96BQ3 446 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-207ENST00000566095 COLEC11Q9BWP8 271 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 RNF39Q9H2S5 420 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 AAASQ9NRG9 546 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 GDAP2Q9NXN4 497 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 ARHGAP20Q9P2F6 1191 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
SF3B3-207ENST00000566095 KIAA1257Q9ULG3 409 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 PCDHB4Q9Y5E5 795 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 PTPRJQ12913 1337 aa10.51□□□□□ -0.73
SF3B3-207ENST00000566095 A0A0A6YYK5 440 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-207ENST00000566095 SOWAHDA6NJG2 315 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 KPNA7A9QM74 516 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 TMEM189-UBE2V1I3L0A0 370 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 PTGESO14684 152 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 AKR1B10O60218 316 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 ODC1P11926 461 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 GZMAP12544 262 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
SF3B3-207ENST00000566095 LHX1P48742 406 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 WNT7BP56706 349 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 SNX16P57768 344 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 KIF5AQ12840 1032 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 IFI16Q16666 785 aaKnown RBP10.5□□□□□ -0.73
SF3B3-207ENST00000566095 DNTTIP2Q5QJE6 756 aaKnown RBP10.5□□□□□ -0.73
SF3B3-207ENST00000566095 PHLDB3Q6NSJ2 640 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 TRIM72Q6ZMU5 477 aa10.5□□□□□ -0.73
SF3B3-207ENST00000566095 RTN4RL1Q86UN2 441 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms