RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ZNF229Q9UJW7 825 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 ADGRA2Q96PE1 1338 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 ZNF185O15231 689 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 RALBP11234 206 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 NLRP11P59045 1033 aaKnown RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SNAPC2Q13487 334 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SCARF1Q14162 830 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SGO1Q5FBB7 561 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SYDE1Q6ZW31 735 aaPredicted RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 CLEC4FQ8N1N0 589 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 ZNF280CQ8ND82 737 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 ZFP42Q96MM3 310 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 APOL5Q9BWW9 433 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 MTMR4Q9NYA4 1195 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 CD4P01730 458 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 ATXN3P54252 364 aaPredicted RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 LONRF1Q17RB8 773 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.25□□□□□ -0.135e-6■□□□□ 9.6
CX3CL1-204ENST00000565912 SGMS1Q86VZ5 419 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 NPHS2Q9NP85 383 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 DAGLAQ9Y4D2 1042 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 EPB42P16452 691 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SERPINB4P48594 390 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 FMO5P49326 533 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 GALCP54803 685 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 DEPDC1Q5TB30 811 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 DCP1BQ8IZD4 617 aaKnown RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 C4orf33Q8N1A6 199 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 TBC1D16Q8TBP0 767 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 FAM129AQ9BZQ8 928 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 TRIM9Q9C026 710 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 ZCCHC17Q9NP64 241 aaKnown RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 UVRAGQ9P2Y5 699 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SETBP1Q9Y6X0 1596 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 WDR47O94967 919 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 NDUFB10O96000 172 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 NR3C2P08235 984 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 IMPDH2P12268 514 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 ZNF543Q08ER8 600 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SDE2Q6IQ49 451 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 GLB1LQ6UWU2 654 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 C11orf96Q7Z7L8 435 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 IPMKQ8NFU5 416 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 SCFD2Q8WU76 684 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 NSUN4Q96CB9 384 aaKnown RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 PARK7Q99497 189 aaKnown RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 FAM118BQ9BPY3 351 aa14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 H2AFY2Q9P0M6 372 aaPredicted RBP14.25□□□□□ -0.13
CX3CL1-204ENST00000565912 CFAP73A6NFT4 308 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 MYL2P10916 166 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 CLEC10AQ8IUN9 316 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 C9orf72Q96LT7 481 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 KIF2CQ99661 725 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 ZFYVE28Q9HCC9 887 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 NEU2Q9Y3R4 380 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 PNPLA7Q6ZV29 1317 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 hCG_2014768A0A024R1R8 64 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 PHF2O75151 1096 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 LAMB3Q13751 1172 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 PIGHQ14442 188 aaPredicted RBP14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 ARMC6Q6NXE6 501 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 LRRC8BQ6P9F7 803 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 BTNL9Q6UXG8 535 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 DTX3LQ8TDB6 740 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 OLFM3Q96PB7 478 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 GPR63Q9BZJ6 419 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 MRFAP1Q9Y605 127 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 C19orf81C9J6K1 198 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 MAGEB2O15479 319 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 MYBP10242 640 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 CDH2P19022 906 aaPredicted RBP14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 SOAT1P35610 550 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 TRPC1P48995 793 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 CNGA3Q16281 694 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 LRRC36Q1X8D7 754 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 CATSPER1Q8NEC5 780 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 UBA3Q8TBC4 463 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 SLC38A7Q9NVC3 462 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 ZSCAN32Q9NX65 697 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 FBXO2Q9UK22 296 aaPredicted RBP14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 CHMP2BQ9UQN3 213 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 PPRC1Q5VV67 1664 aaKnown RBP14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 NRKQ7Z2Y5 1582 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 CENPAP49450 140 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 FOXO4P98177 505 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 ZNF200P98182 395 aaPredicted RBP14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 TKFCQ3LXA3 575 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 SV2CQ496J9 727 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 DCAF6Q58WW2 860 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 ZRANB3Q5FWF4 1079 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 PRAMEF18Q5VWM3 479 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 LPAR1Q92633 364 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 FAM162AQ96A26 154 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 SPATA16Q9BXB7 569 aa14.24□□□□□ -0.13
CX3CL1-204ENST00000565912 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms