RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 LMAN2Q12907 356 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 TFDP1Q14186 410 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 PTPAQ15257 358 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 WDR44Q5JSH3 913 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 SLC27A1Q6PCB7 646 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 C11orf74Q86VG3 221 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 TTC8Q8TAM2 541 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 CEP170P1Q96L14 293 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 ZNF512Q96ME7 567 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-215ENST00000565559 BBC3Q96PG8 261 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-215ENST00000565559 CYP4F11Q9HBI6 524 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 ASAH2Q9NR71 780 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 LOC400499M0QZD8 3231 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 LAMA5O15230 3695 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 TDRD15B5MCY1 1934 aaKnown RBP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 WDR81Q562E7 1941 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 SPAARA0A1B0GVQ0 90 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 ESYT2A0FGR8 921 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 THP07101 528 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 MYL4P12829 197 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 NPEPPSP55786 919 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 PTENP60484 403 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 FUT2Q10981 343 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 SCAPQ12770 1279 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 MXD4Q14582 209 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 RTN1Q16799 776 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 ARHGAP29Q52LW3 1261 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 DHX32Q7L7V1 743 aaKnown RBP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 FERMT3Q86UX7 667 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 TCEAL8Q8IYN2 117 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 BICD2Q8TD16 824 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 HNRNPLLQ8WVV9 542 aaKnown RBP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 LRIG1Q96JA1 1093 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 ZMYND12Q9H0C1 365 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 CCDC86Q9H6F5 360 aaKnown RBP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
CAPN3-215ENST00000565559 IL21Q9HBE4 155 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 CACNA2D2Q9NY47 1150 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 INSL5Q9Y5Q6 135 aa12.29□□□□□ -0.44
CAPN3-215ENST00000565559 LAMA1P25391 3075 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 PSMD10O75832 226 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 ATF2P15336 505 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 ARF4P18085 180 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-215ENST00000565559 PSMA5P28066 241 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 ROR1Q01973 937 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 EMC2Q15006 297 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 TEAD2Q15562 447 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 ZNF423Q2M1K9 1284 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 ADCK5Q3MIX3 580 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 SGMS1Q86VZ5 419 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 GJA10Q969M2 543 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 TMEM209Q96SK2 561 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 GTSE1Q9NYZ3 720 aa12.28□□□□□ -0.44
CAPN3-215ENST00000565559 FREM2Q5SZK8 3169 aa12.27□□□□□ -0.44
CAPN3-215ENST00000565559 DCLK1O15075 740 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 B3GAT3O94766 335 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 ABLIM3O94929 683 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 APBB3O95704 486 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 CAPNS1P04632 268 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 GJA1P17302 382 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 QARSP47897 775 aaKnown RBP12.27□□□□□ -0.45
CAPN3-215ENST00000565559 USP11P51784 963 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 ARPP19P56211 112 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 ANAPC15P60006 121 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-215ENST00000565559 C8orf34Q49A92 452 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 SLC8B1Q6J4K2 584 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 CHCHD4Q8N4Q1 142 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 HHIPQ96QV1 700 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 TM6SF1Q9BZW5 370 aa12.27□□□□□ -0.45
CAPN3-215ENST00000565559 TMEM189-UBE2V1I3L0A0 370 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 ZBTB43O43298 467 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 PRKCBP05771 671 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 TKTP29401 623 aaKnown RBP12.26□□□□□ -0.45
CAPN3-215ENST00000565559 MAPK8P45983 427 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 IRX4P78413 519 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 MBTD1Q05BQ5 628 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 POU5F1BQ06416 359 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 ITPRIPL2Q3MIP1 535 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 USP39Q53GS9 565 aaKnown RBP12.26□□□□□ -0.45
CAPN3-215ENST00000565559 APOA5Q6Q788 366 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 BLOC1S2Q6QNY1 142 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 OTUD6AQ7L8S5 288 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 FBXL16Q8N461 479 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 RSPRY1Q96DX4 576 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 JAKMIP1Q96N16 626 aaKnown RBP12.26□□□□□ -0.45
CAPN3-215ENST00000565559 NUSAP1Q9BXS6 441 aaKnown RBP12.26□□□□□ -0.45
CAPN3-215ENST00000565559 LRRC2Q9BYS8 371 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 NCANO14594 1321 aa12.26□□□□□ -0.45
CAPN3-215ENST00000565559 A0A1B0GUA9 196 aa12.25□□□□□ -0.45
CAPN3-215ENST00000565559 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
CAPN3-215ENST00000565559 PATE3B3GLJ2 98 aa12.25□□□□□ -0.45
CAPN3-215ENST00000565559 PTGESO14684 152 aa12.25□□□□□ -0.45
CAPN3-215ENST00000565559 B4GALT5O43286 388 aa12.25□□□□□ -0.45
CAPN3-215ENST00000565559 MOSPD3O75425 235 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms