RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PDP2Q9P2J9 529 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ARHGAP28Q9P2N2 729 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 MYO1AQ9UBC5 1043 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PPARGC1AQ9UBK2 798 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 HDAC6Q9UBN7 1215 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 SEPT3Q9UH03 358 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 LIMA1Q9UHB6 759 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 SALL4Q9UJQ4 1053 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ADAM21Q9UKJ8 722 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DENND2AQ9ULE3 1009 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DUSP12Q9UNI6 340 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ZBTB1Q9Y2K1 713 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PCDHGB7Q9Y5F8 929 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 NHSL1Q5SYE7 1610 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 MYO5AQ9Y4I1 1855 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ZNF831Q5JPB2 1677 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 COL14A1Q05707 1796 aaKnown RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 BCORQ6W2J9 1755 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 ARPC4-TTLL3A0A0A6YYG9 625 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TMEM221A6NGB7 291 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TSPY2A6NKD2 308 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 FAM155AB1AL88 458 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 NFKBIEO00221 500 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 ZBTB14O43829 449 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 B4GALT4O60513 344 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TSPAN1O60635 241 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 RTN2O75298 545 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 RTN3O95197 1032 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 SNX4O95219 450 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 CPP00450 1065 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 S100A6P06703 90 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TSPY3P0CV98 308 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TSPY8P0CW00 308 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 DRD2P14416 443 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 GPTP24298 496 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 PBLDP30039 288 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 GUCY1A2P33402 732 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 IGHMBP2P38935 993 aaKnown RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 MAGEA9P43362 315 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TM4SF4P48230 202 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 ATP2C1P98194 919 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TSPY1Q01534 308 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 SPAG1Q07617 926 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 CACNB2Q08289 660 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 GOLGA8FQ08AF8 430 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 GOLGA8DPQ0D2H9 430 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 PRKG2Q13237 762 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TRIM14Q14142 442 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 PLCB4Q15147 1175 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 PPP1R7Q15435 360 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 NPY5RQ15761 445 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 SLC14A2Q15849 920 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 WHAMMP3Q1A5X7 153 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 BBS9Q3SYG4 887 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TRIM68Q6AZZ1 485 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 KDELC1Q6UW63 502 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 MICU3Q86XE3 530 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 RAB11FIP4Q86YS3 637 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TP53INP2Q8IXH6 220 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TCEAL8Q8IYN2 117 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 LCORLQ8N3X6 602 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 FAM26EQ8N5C1 309 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 NKAPQ8N5F7 415 aaKnown RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TTC16Q8NEE8 873 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 NUP133Q8WUM0 1156 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 FATE1Q969F0 183 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 TIFAQ96CG3 184 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 NRBF2Q96F24 287 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 DESI2Q9BSY9 194 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 B3GNT4Q9C0J1 378 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 EPC1Q9H2F5 836 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 ELAC1Q9H777 363 aaKnown RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 ANKZF1Q9H8Y5 726 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 ARMT1Q9H993 441 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 MRPL44Q9H9J2 332 aaKnown RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 PLCB1Q9NQ66 1216 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 ADD3Q9UEY8 706 aaKnown RBP5.53□□□□□ -1.52
CAPN3-214ENST00000565274 DCTN4Q9UJW0 460 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 CDC23Q9UJX2 597 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 NFE2L3Q9Y4A8 694 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 SLC4A4Q9Y6R1 1079 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 SLIT2O94813 1529 aa5.53□□□□□ -1.52
CAPN3-214ENST00000565274 MYH3P11055 1940 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 FAM95CA0A1B0GW59 222 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 EME2A4GXA9 379 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 INO80B-WBP1J3KQ70 363 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 SOX1O00570 391 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 ABLIM1O14639 778 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 POLR2DO15514 142 aaKnown RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 MFAP3LO75121 409 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 GUCA1CO95843 209 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 KRT1P04264 644 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 P4HA1P13674 534 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 ATF4P18848 351 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 GARTP22102 1010 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 PSMA4P25789 261 aaKnown RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 KRT2P35908 639 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms