RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 PSMD6Q15008 389 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 SCARA3Q6AZY7 606 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 KATNAL2Q8IYT4 538 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 ABRAQ8N0Z2 381 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 KIF2BQ8N4N8 673 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 RDM1Q8NG50 284 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 FHDC1Q9C0D6 1143 aaPredicted RBP16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 CYP26B1Q9NR63 512 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 PRKAG3Q9UGI9 489 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 IGF2BP3O00425 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 ZBED4O75132 1171 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 GNA15P30679 374 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 MAGEA4P43358 317 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 MGAT5Q09328 741 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 HP1BP3Q5SSJ5 553 aaPredicted RBP16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 CRELD2Q6UXH1 353 aaPredicted RBP16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 ARHGEF18Q6ZSZ5 1173 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 MCPH1Q8NEM0 835 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 MIEF2Q96C03 454 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 RPAP3Q9H6T3 665 aaPredicted RBP16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 ZNF541Q9H0D2 1346 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 RASA4BC9J798 803 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 RASA4O43374 803 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 ZSCAN5DPP0CG00 497 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 KCNA2P16389 499 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 CCND2P30279 289 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 FOXN2P32314 431 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 COPS2P61201 443 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 RPL7AP62424 266 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 PRKCEQ02156 737 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 CUL2Q13617 745 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 TMED2Q15363 201 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 ZBTB41Q5SVQ8 909 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 PLEKHA7Q6IQ23 1121 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 MAGEB18Q96M61 343 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 SENP7Q9BQF6 1050 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 CCDC77Q9BR77 488 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 MRPL47Q9HD33 250 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 RNF146Q9NTX7 359 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 EURLQ9NYK6 297 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 NKIRAS1Q9NYS0 192 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 DNPEPQ9ULA0 475 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 L3MBTL1Q9Y468 752 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 WDR81Q562E7 1941 aa16.41■□□□□ 0.22
GTF3C1-205ENST00000564747 VWA5AO00534 786 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 PSEN1P49768 467 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 ALDH5A1P51649 535 aaPredicted RBP16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 NFX1Q12986 1120 aaKnown RBP16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 ZNF268Q14587 947 aaPredicted RBP16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 STAT4Q14765 748 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 PSME4Q14997 1843 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 MTERF2Q49AM1 385 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 ACCSLQ4AC99 568 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 MIS18BP1Q6P0N0 1132 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 MAML1Q92585 1016 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 PAIP2Q9BPZ3 127 aaKnown RBP16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 TRIM33Q9UPN9 1127 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 ETS1P14921 441 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 TAC1P20366 129 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 RIPK1Q13546 671 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 ZFYVE27Q5T4F4 411 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 FAM47EQ6ZV65 393 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 MTMR14Q8NCE2 650 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 BBOF1Q8ND07 529 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 TMEM143Q96AN5 459 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 KLHL29Q96CT2 875 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 GPRASP2Q96D09 838 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 SAYSD1Q9NPB0 183 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 UTRNP46939 3433 aa16.4■□□□□ 0.22
GTF3C1-205ENST00000564747 SPAG7O75391 227 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 PSAPP07602 524 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 GCAP28676 217 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 GBP2P32456 591 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 CLNS1AP54105 237 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 WDR4P57081 412 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 ENPEPQ07075 957 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 RELL1Q8IUW5 271 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 RXFP1Q9HBX9 757 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 KIAA1586Q9HCI6 787 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 A0A1B0GUA9 196 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 KRT16P08779 473 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 RTP1P59025 263 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 FASTKD3Q14CZ7 662 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 SEZ6Q53EL9 994 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 PHF13Q86YI8 300 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 GBP7Q8N8V2 638 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 RBBP8NLQ8NC74 664 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 FEZF2Q8TBJ5 459 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 STAMBPL1Q96FJ0 436 aa16.39■□□□□ 0.21
GTF3C1-205ENST00000564747 ZNF148Q9UQR1 794 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms