RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 OLIG1Q8TAK6 271 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 COG1Q8WTW3 980 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 HNRNPLLQ8WVV9 542 aaKnown RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PSPC1Q8WXF1 523 aaKnown RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SHC3Q92529 594 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RNPC3Q96LT9 517 aaKnown RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CEP89Q96ST8 783 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PNKPQ96T60 521 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CGRRF1Q99675 332 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MSTO1Q9BUK6 570 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 C2orf40Q9H1Z8 148 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TOPORSQ9NS56 1045 aaPredicted RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZNF446Q9NWS9 450 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ANKFY1Q9P2R3 1169 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MICAL3Q7RTP6 2002 aa7.96□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ANK1P16157 1881 aa7.96□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MUC6Q6W4X9 2439 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 ANKRD62A6NC57 917 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TMCO5BA8MYB1 307 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PDE2AO00408 941 aaPredicted RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CES2O00748 559 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 NBNO60934 754 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SEC31AO94979 1220 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PARNO95453 639 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 FGBP02675 491 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CHRNA1P02708 482 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 RPLP2P05387 115 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PRKCBP05771 671 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TNNI1P19237 187 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 IBSPP21815 317 aaPredicted RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 NLRP11P59045 1033 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 MGAT3Q09327 533 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 DRP2Q13474 957 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 BIRC3Q13489 604 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 MBTPS1Q14703 1052 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SHHQ15465 462 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 LONRF2Q1L5Z9 754 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CDCA2Q69YH5 1023 aaPredicted RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CNKSR3Q6P9H4 555 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TRAF7Q6Q0C0 670 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 ZPBP2Q6X784 338 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SV2AQ7L0J3 742 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PEX26Q7Z412 305 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 RHPN2Q8IUC4 686 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 RHOT2Q8IXI1 618 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 FAM71AQ8IYT1 594 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PLCD3Q8N3E9 789 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 NME8Q8N427 588 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 LINC01465Q8N7H1 131 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 LRRC57Q8N9N7 239 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SPDYE1Q8NFV5 336 aaPredicted RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TPCN2Q8NHX9 752 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TAS1R2Q8TE23 839 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 EPS8L1Q8TE68 723 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SLC20A1Q8WUM9 679 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 NLRP7Q8WX94 980 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SPOCK2Q92563 424 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SEMA4DQ92854 862 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PBKQ96KB5 322 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SNX27Q96L92 541 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 NLRP4Q96MN2 994 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PSMB7Q99436 277 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 OSMRQ99650 979 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SELENOOQ9BVL4 669 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TARS2Q9BW92 718 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 MRPL4Q9BYD3 311 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CELF4Q9BZC1 486 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 OSBPL7Q9BZF2 842 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 MTIF3Q9H2K0 278 aaKnown RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 ACBD3Q9H3P7 528 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CDHR5Q9HBB8 845 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 RAB20Q9NX57 234 aa7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 RBAKQ9NYW8 714 aaPredicted RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SUCLA2Q9P2R7 463 aaPredicted RBP7.96□□□□□ -1.14
MAP1LC3B-205ENST00000564638 MYO9BQ13459 2157 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 A0A0B4J269 797 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 IGKV6-21A0A0C4DH24 114 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CLSTN1O94985 981 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 HLA-DRAP01903 254 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 PFKMP08237 780 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 HARSP12081 509 aaKnown RBP7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 ABCB4P21439 1286 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CD52P31358 61 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CXCR5P32302 372 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 DNA2P51530 1060 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 AP3M2P53677 418 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 VSNL1P62760 191 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TNNC1P63316 161 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 CLDN10P78369 228 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 GCNT1Q02742 428 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 LAMTOR4Q0VGL1 99 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 NFX1Q12986 1120 aaKnown RBP7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 GPS2Q13227 327 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 SURF1Q15526 300 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 MAPK6Q16659 721 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TMEM132AQ24JP5 1023 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 ZACNQ401N2 412 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 FAM26DQ5JW98 314 aa7.95□□□□□ -1.14
MAP1LC3B-205ENST00000564638 FBXO47Q5MNV8 452 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms