RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SLC17A8Q8NDX2 589 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 SYNPO2LQ9H987 977 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 CASS4Q9NQ75 786 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 MAN1C1Q9NR34 630 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 AASDHPPTQ9NRN7 309 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 IP6K2Q9UHH9 426 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 MAST3O60307 1309 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 ESRRBO95718 433 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 POU2F2P09086 479 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 ADRA1BP35368 520 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 NANOS3P60323 173 aaKnown RBP6.29□□□□□ -1.4
UBR1-205ENST00000564540 MPP3Q13368 585 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 CCDC93Q567U6 631 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 C3orf20Q8ND61 904 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 TMEM125Q96AQ2 219 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 LRIG1Q96JA1 1093 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 AIFM2Q9BRQ8 373 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 GTPBP4Q9BZE4 634 aaKnown RBP6.29□□□□□ -1.4
UBR1-205ENST00000564540 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
UBR1-205ENST00000564540 CTTNBP2NLQ9P2B4 639 aa6.29□□□□□ -1.4
UBR1-205ENST00000564540 POLR2AP24928 1970 aaKnown RBP6.29□□□□□ -1.4
UBR1-205ENST00000564540 TRGV11A0A075B6L2 103 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 E9PLN8 166 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 KIAA0355O15063 1070 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 ALDH1L1O75891 902 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 NUDT3O95989 172 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 KCNA2P16389 499 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 SMARCA1P28370 1054 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 PHKA1P46020 1223 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 PSMC1P62191 440 aaKnown RBP6.28□□□□□ -1.4
UBR1-205ENST00000564540 MC2RQ01718 297 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 ZNF844Q08AG5 666 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 NOGQ13253 232 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 Q6ZNX1 250 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 COLGALT2Q8IYK4 626 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 CFAP52Q8N1V2 620 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 SSH3Q8TE77 659 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 RGMAQ96B86 450 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 VKORC1Q9BQB6 163 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 C1orf43Q9BWL3 253 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 SLAMF7Q9NQ25 335 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 ZNHIT2Q9UHR6 403 aa6.28□□□□□ -1.4
UBR1-205ENST00000564540 A0A1W2PS29 197 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 PRSS29PA6NIE9 313 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 DTNBO60941 627 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 SUN1O94901 812 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 PF4V1P10720 104 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 IGBP1P78318 339 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 CD300EQ496F6 205 aaPredicted RBP6.27□□□□□ -1.41
UBR1-205ENST00000564540 HEATR3Q7Z4Q2 680 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 DNAJC10Q8IXB1 793 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 BRD9Q9H8M2 597 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 TCF7L1Q9HCS4 588 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 TYW1Q9NV66 732 aaKnown RBP6.27□□□□□ -1.41
UBR1-205ENST00000564540 ABCF2Q9UG63 623 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 POLHQ9Y253 713 aa6.27□□□□□ -1.41
UBR1-205ENST00000564540 PRAMEF33A0A0G2JMD5 474 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 ZNF785A8K8V0 405 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 PRAMEF10O60809 474 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 FTLP02792 175 aaPredicted RBP6.26□□□□□ -1.41
UBR1-205ENST00000564540 GJB1P08034 283 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 PRDX5P30044 214 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 CLK3P49761 638 aaKnown RBP6.26□□□□□ -1.41
UBR1-205ENST00000564540 MAP2K6P52564 334 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 HK3P52790 923 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 TTF1Q15361 905 aaPredicted RBP6.26□□□□□ -1.41
UBR1-205ENST00000564540 SF3B3Q15393 1217 aaKnown RBP6.26□□□□□ -1.41
UBR1-205ENST00000564540 PGS1Q32NB8 556 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 SP5Q6BEB4 398 aaPredicted RBP6.26□□□□□ -1.41
UBR1-205ENST00000564540 CLNKQ7Z7G1 428 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 LNX2Q8N448 690 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 SH2D3CQ8N5H7 860 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 AOPEPQ8N6M6 819 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 FBXO41Q8TF61 875 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 RIOX1Q9H6W3 641 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 MRPS18AQ9NVS2 196 aaKnown RBP6.26□□□□□ -1.41
UBR1-205ENST00000564540 SIDT1Q9NXL6 827 aaKnown RBP6.26□□□□□ -1.41
UBR1-205ENST00000564540 KCTD5Q9NXV2 234 aa6.26□□□□□ -1.41
UBR1-205ENST00000564540 CCDC195A0A1B0GUA6 201 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 ABLIM3O94929 683 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 GNAI3P08754 354 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 GATA3P23771 443 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 CXCR5P32302 372 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 CYP2C19P33261 490 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 PIK3CGP48736 1102 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 RPS7P62081 194 aaKnown RBP6.25□□□□□ -1.41
UBR1-205ENST00000564540 GNAI1P63096 354 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 FPGSQ05932 587 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 MCL1Q07820 350 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 THEMIS2Q5TEJ8 643 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 TAPT1Q6NXT6 567 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 ZNF575Q86XF7 245 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 FAM90A1Q86YD7 464 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 TNPO1Q92973 898 aaKnown RBP6.25□□□□□ -1.41
UBR1-205ENST00000564540 TRIB1Q96RU8 372 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 CRAMP1Q96RY5 1269 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 PRDM13Q9H4Q3 707 aa6.25□□□□□ -1.41
UBR1-205ENST00000564540 ALG13Q9NP73 1137 aaKnown RBP6.25□□□□□ -1.41
UBR1-205ENST00000564540 ZAR1LA6NP61 321 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms