RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 YIPF3Q9GZM5 350 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 NSRP1Q9H0G5 558 aaKnown RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 ZWILCHQ9H900 591 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 PTPRHQ9HD43 1115 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 DMAC2Q9NW81 257 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 PPP2R3BQ9Y5P8 575 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 SNX5Q9Y5X3 404 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 GMEB1Q9Y692 573 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 CTAGE15A4D2H0 777 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 WDR64B1ANS9 1081 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 PPP1R12BO60237 982 aaPredicted RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 LCA5LO95447 670 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 CTAGE8P0CG41 777 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 CCND2P30279 289 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 GNALP38405 381 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 FMO5P49326 533 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 PPP3CAQ08209 521 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 ASIC2Q16515 512 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 SUPT20HL1Q3ZLR7 823 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 GADL1Q6ZQY3 521 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 RTL10Q7L3V2 364 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 CYFIP1Q7L576 1253 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 CTAGE6Q86UF2 777 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 CTAGE4Q8IX94 777 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 GPR161Q8N6U8 529 aaKnown RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 EPS8L3Q8TE67 593 aaKnown RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 CEP170P1Q96L14 293 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 INPP4AQ96PE3 977 aaPredicted RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 CCT7Q99832 543 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 MOV10L1Q9BXT6 1211 aaKnown RBP9.72□□□□□ -0.85
TCF4-224ENST00000564403 ZCWPW1Q9H0M4 648 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 PLEKHA4Q9H4M7 779 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 EFR3BQ9Y2G0 817 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 PCDHA10Q9Y5I2 948 aa9.72□□□□□ -0.85
TCF4-224ENST00000564403 FTCDO95954 541 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 PLS3P13797 630 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 GCLMP48507 274 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 GEMIN4P57678 1058 aaKnown RBP9.71□□□□□ -0.85
TCF4-224ENST00000564403 PKN2Q16513 984 aaKnown RBP9.71□□□□□ -0.85
TCF4-224ENST00000564403 PAPD7Q5XG87 772 aaKnown RBP9.71□□□□□ -0.85
TCF4-224ENST00000564403 C4orf19Q8IY42 314 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 ANKRD35Q8N283 1001 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 MAML1Q92585 1016 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 GLMNQ92990 594 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 CCDC127Q96BQ5 260 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 MS4A14Q96JA4 679 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 GDAP1L1Q96MZ0 367 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 TCF12Q99081 682 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 ACAD9Q9H845 621 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 POLMQ9NP87 494 aaPredicted RBP9.71□□□□□ -0.85
TCF4-224ENST00000564403 ACP6Q9NPH0 428 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 GALNT8Q9NY28 637 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 AIPL1Q9NZN9 384 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 PFDN2Q9UHV9 154 aa9.71□□□□□ -0.85
TCF4-224ENST00000564403 PFASO15067 1338 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 ADGRA3Q8IWK6 1321 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 SSU72P8A0A1W2PR75 194 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 A6NCN8 305 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 RECKO95980 971 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 PGK2P07205 417 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 ATP5DP30049 168 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 ADSSP30520 456 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 GUCY2FP51841 1108 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 VSNL1P62760 191 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 SLC18A3Q16572 532 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 PHLDB3Q6NSJ2 640 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 MIS18BP1Q6P0N0 1132 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 TMEM53Q6P2H8 277 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 TMCO3Q6UWJ1 677 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 ARHGEF18Q6ZSZ5 1173 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 CBWD2Q8IUF1 395 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 SULF1Q8IWU6 871 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 GALNT15Q8N3T1 639 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 CEP112Q8N8E3 955 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 NPLOC4Q8TAT6 608 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 SCG3Q8WXD2 468 aaKnown RBP9.71□□□□□ -0.86
TCF4-224ENST00000564403 VPS50Q96JG6 964 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 C12orf42Q96LP6 360 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 EDEM3Q9BZQ6 932 aa9.71□□□□□ -0.86
TCF4-224ENST00000564403 PIH1D1Q9NWS0 290 aaKnown RBP9.71□□□□□ -0.86
TCF4-224ENST00000564403 KIAA1217Q5T5P2 1943 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 STBD1O95210 358 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 UBL4AP11441 157 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 ATF7P17544 494 aaPredicted RBP9.7□□□□□ -0.86
TCF4-224ENST00000564403 HOXA7P31268 230 aaPredicted RBP9.7□□□□□ -0.86
TCF4-224ENST00000564403 NPTX2P47972 431 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 ACTR2P61160 394 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 TAGLNQ01995 201 aaKnown RBP9.7□□□□□ -0.86
TCF4-224ENST00000564403 C2orf54Q08AI8 447 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
TCF4-224ENST00000564403 TMEM63BQ5T3F8 832 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 LDLRAD1Q5T700 205 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 PALB2Q86YC2 1186 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 USP38Q8NB14 1042 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 KAT5Q92993 513 aa9.7□□□□□ -0.86
TCF4-224ENST00000564403 DCPSQ96C86 337 aaKnown RBP9.7□□□□□ -0.86
TCF4-224ENST00000564403 IQCDQ96DY2 449 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms